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We analyse the dynamics of a two dimensional system of interacting active dumbbells. We characterise the mean-square displacement, linear response function and deviation from the equilibrium fluctuation-dissipation theorem as a function of…

Monte Carlo computer simulations of a quasi two dimensional (2D) dipolar fluid at low and intermediate densities indicate that the structure of the fluid is well described by an ideal mixture of self-assembling clusters. A detailed analysis…

Soft Condensed Matter · Physics 2007-05-23 J. M. Tavares , J. J. Weis , M. M. Telo da Gama

We develop a model to describe the properties of random assemblies of polydisperse hard spheres. We show that the key features to describe the system are (i) the dependence between the free volume of a sphere and the various coordination…

Disordered Systems and Neural Networks · Physics 2015-05-19 Maximilien Danisch , Yuliang Jin , Hernan A. Makse

A scaling theory is developed for diffusion-limited cluster aggregation in a porous medium, where the primary particles and clusters stick irreversibly to the walls of the pore space as well as to each other. Three scaling regimes are…

Soft Condensed Matter · Physics 2009-11-13 Patrick B. Warren

Single-layer atom or vacancy clusters in the presence of electromigration are studied theoretically assuming an isotropic medium. A variety of distinctive behaviors distinguish the response in the three standard limiting cases of periphery…

Materials Science · Physics 2009-10-31 O. Pierre-Louis , T. L. Einstein

Collective and directed motility or swarming is an emergent phenomenon displayed by many self-organized assemblies of active biological matter such as clusters of embryonic cells during tissue development, cancerous cells during tumor…

Biological Physics · Physics 2016-04-05 Katherine Copenhagen , Ajay Gopinathan

Molecular dynamics simulations are performed to investigate heterogeneous dynamics in amorphous glassy materials under oscillatory shear strain. We consider three-dimensional binary Lennard-Jones mixture well below the glass transition…

Soft Condensed Matter · Physics 2013-05-10 Nikolai V. Priezjev

Convenient variational formula for collective diffusion of many particles adsorbed at lattices of arbitrary geometry is formulated. The approach allows to find the expressions for the diffusion coefficient for any value of the system's…

Statistical Mechanics · Physics 2018-07-04 Marcin Mińkowski , Magdalena A. Załuska--Kotur

The problem of natural selection in dispersal-structured populations consisting of individuals characterized by different diffusion coefficients is studied. The competition between the organisms is taken into account through the assumption…

Adaptation and Self-Organizing Systems · Physics 2020-05-01 E. Heinsalu , D. Navidad Maeso , M. Patriarca

Diffusion of Cu adatoms and dimers on Cu(111) and Ag(111) surfaces is analyzed basing on ab-initio surface potentials. As compared to the simple single adatom jumps that alternate between two states, dimers undergo more complex diffusion…

Statistical Mechanics · Physics 2015-09-30 Marcin Mińkowski , Magdalena A. Załuska--Kotur

We consider a reaction-diffusion model incorporating the reactions A -> 0, A -> 2A and 2A -> 3A. Depending on the relative rates for sexual and asexual reproduction of the quantity A, the model exhibits either a continuous or first-order…

Statistical Mechanics · Physics 2009-11-13 Alastair L. Windus , Henrik Jeldtoft Jensen

We present simulations of a hard disc system and analyze the time evolution of the dynamic heterogeneities. We characterize the time evolution of slow regions and slow particles individually. The motion of slow clusters turns out to be very…

Soft Condensed Matter · Physics 2009-11-07 Burkhard Doliwa , Andreas Heuer

We present a detailed molecular-dynamics study of the diffusion and coalescence of large (249-atom) gold clusters on graphite surfaces. The diffusivity of monoclusters is found to be comparable to that for single adatoms. Likewise, and even…

Materials Science · Physics 2009-10-31 L. J. Lewis , P. Jensen , N. Combe , J-L. Barrat

The stochastic dynamics of colloidal particles with surface activity--in the form of catalytic reaction or particle release--and self-phoretic effects is studied analytically. Three different time scales corresponding to inertial effects,…

Soft Condensed Matter · Physics 2015-05-13 Ramin Golestanian

When polydisperse granular systems are sheared, the transverse dynamics is characterized by the interplay of size segregation and diffusion. Segregation in nonuniform and confined shearing flows is studied using annular shear cell…

Other Condensed Matter · Physics 2026-01-29 Santiago Caro , Riccardo Artoni , Patrick Richard , Michele Larcher , James T. Jenkins

Over the past decades, discrete dislocation dynamics simulations have been shown to reliably predict the evolution of dislocation microstructures for micrometer-sized metallic samples. Such simulations provide insight into the governing…

The dynamics of steps on crystal surfaces is considered. In general, the meandering of the steps obeys a subdiffusive behaviour. The characteristic asymptotic time laws depend on the microscopic mechanism for detachment and attachment of…

Condensed Matter · Physics 2009-10-31 W. Selke , M. Bisani

The migration of active particles in slowly moving, crowded, and heterogeneous media is fundamental to various biological processes and technological applications, such as cargo transport. In this study, we numerically investigate the…

Soft Condensed Matter · Physics 2024-12-04 Meng-Yuan Li , Ning Zheng , Yan-Wei Li

Metal clusters are partway between molecular and bulk systems and thus exhibit special physical and chemical properties. Atoms can rearrange within a cluster to form different structural isomers. Internal degrees of freedom and the…

Materials Science · Physics 2019-07-31 Barbara A. J. Lechner , Fabian Knoller , Alexander Bourgund , Ueli Heiz , Friedrich Esch

Matter gets organized at several levels of structural rearrangements. At mesoscopic level one can distinguish between two types of rearrangements, conforming to different close-packing or densification conditions, appearing during different…

Soft Condensed Matter · Physics 2012-10-03 Adam Gadomski , Marcel Ausloos
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