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Related papers: A Monte-Carlo study of meanders

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A popular concept which describes the structure of polymer interfaces by ``intrinsic profiles'' centered around a two dimensional surface, the ``local interface position'', is tested by extensive Monte Carlo simulations of interfaces…

Soft Condensed Matter · Physics 2009-10-31 A. Werner , F. Schmid , M. Mueller , K. Binder

Estimating the unknown density from which a given independent sample originates is more difficult than estimating the mean, in the sense that for the best popular non-parametric density estimators, the mean integrated square error converges…

Statistics Theory · Mathematics 2021-09-08 Pierre L'Ecuyer , Florian Puchhammer , Amal Ben Abdellah

We study the conformational behavior of a polymer adsorbed at an attractive nanostring and construct the complete structural phase diagram in dependence of the binding strength and effective thickness of the string. For this purpose, Monte…

Soft Condensed Matter · Physics 2011-03-11 Thomas Vogel , Michael Bachmann

As an extension of the former study on 2-dimensional systems, we simulate phase behavior of polymer-grafted colloidal particles in 3 dimensions by molecular Monte Carlo technique in the canonical ensemble. We use a spherically symmetric…

Soft Condensed Matter · Physics 2014-04-02 Yuki Norizoe , Toshihiro Kawakatsu

We develop a novel biased Monte-Carlo simulation technique to measure the force-extension curves and the distribution function of the extension of fluctuating filaments stretched by external force. The method is applicable for arbitrary…

Soft Condensed Matter · Physics 2007-05-23 David A. Kessler , Yitzhak Rabin

The reptation Monte Carlo algorithm is a simple, physically motivated and efficient method for equilibrating semi-dilute solutions of linear polymers. Here we propose two simple generalizations for the analogue {\it Amoeba} algorithm for…

Soft Condensed Matter · Physics 2024-10-30 Pieter H. W. van der Hoek , Angelo Rosa , Ralf Everaers

Monte Carlo simulations of coarse-grained polymers provide a useful tool to deepen the understanding of conformational and statistical properties of polymers both in physical as well as in biological systems. In this study we sample compact…

Soft Condensed Matter · Physics 2009-05-07 Manfred Bohn , Dieter W. Heermann

We present a scheme for simulating conditioned semimartingales taking values in Riemannian manifolds. Extending the guided bridge proposal approach used for simulating Euclidean bridges, the scheme replaces the drift of the conditioned…

Numerical Analysis · Mathematics 2023-02-16 Mathias Højgaard Jensen , Stefan Sommer

One measure of geometrical complexity of a spatial curve is the number of crossings in a planar projection of the curve. For $N$-noded ring polymers with a fixed knot type, we evaluate numerically the average of the crossing number over…

Soft Condensed Matter · Physics 2016-08-31 Miyuki K. Shimamura , Tetsuo Deguchi

We present Quantum Monte Carlo simulations of a generalization of the Feynman-Kikuchi model which includes the possibility of vacancies and interactions between the particles undergoing exchange. By measuring the winding number (superfluid…

Statistical Mechanics · Physics 2013-05-29 A. Zujev , R. T. Scalettar

Closed meanders are planar configurations of one or several disjoint closed Jordan curves intersecting a given line or curve transversely. They arise as shooting curves of parabolic PDEs in one space dimension, as trajectories of Cartesian…

Combinatorics · Mathematics 2015-04-14 Anna Karnauhova , Stefan Liebscher

By use of a special wave function derived from similarly transformed propagators, this work shows that the energy of a thousand spin-balanced fermions in a three-dimensional harmonic potential can be accurately computed using the Monte…

Computational Physics · Physics 2023-10-31 Siu A. Chin

We propose a novel Monte-Carlo based ab-initio algorithm for directly computing the statistics for quantities of interest in an immiscible two-phase compressible flow. Our algorithm samples the underlying probability space and evolves these…

Numerical Analysis · Mathematics 2023-03-30 Marco Petrella , Remi Abgrall , Siddhartha Mishra

The phase transition in the number partitioning problem (NPP), i.e., the transition from a region in the space of control parameters in which almost all instances have many solutions to a region in which almost all instances have no…

Condensed Matter · Physics 2016-08-16 Peter F. Stadler , Wim Hordijk , José F. Fontanari

We consider the number of crossings in a random labelled tree with vertices in convex position. We give a new proof of the fact that this quantity is asymptotically Gaussian with mean $n^2/6$ and variance $n^3/45$. Furthermore, we give an…

Probability · Mathematics 2022-09-21 Santiago Arenas-Velilla , Octavio Arizmendi

Monte Carlo event generators are an essential tool for data analysis in collider physics. To include subleading quantum corrections, these generators often need to produce negative weight events, which leads to statistical dilution of the…

High Energy Physics - Phenomenology · Physics 2020-10-21 Benjamin Nachman , Jesse Thaler

Using canonical Monte Carlo simulations, we introduce a new numerical procedure for comparing the entropic exponents of polymers with different constraints and/or topologies. Setting up competitions between polymer segments which can…

Soft Condensed Matter · Physics 2007-11-28 Roya Zandi , Yacov Kantor , Mehran Kardar

We present a detailed study of the combinatorial interpretation of matrix integrals, including the examples of tessellations of arbitrary genera, and loop models on random surfaces. After reviewing their methods of solution, we apply these…

Mathematical Physics · Physics 2007-05-23 P. Di Francesco

In this work the thermodynamic properties of short polymer knots (up to 120 segments) defined on a simple cubic lattice are studied with the help of the Wang-Landau Monte Carlo algorithm. The sampling process is performed using pivot…

Soft Condensed Matter · Physics 2015-06-16 Yani Zhao , Franco Ferrari

We develop off-lattice simulations of semiflexible polymer chains subjected to applied mechanical forces using Markov Chain Monte Carlo. Our approach models the polymer as a chain of fixed-length bonds, with configurations updated through…

Soft Condensed Matter · Physics 2024-11-26 Lijie Ding , Chi-Huan Tung , Bobby G. Sumpter , Wei-Ren Chen , Changwoo Do