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An exact mapping is established between sequence alignment, one of the most commonly used tools of computational biology, and the asymmetric exclusion process, one of the few exactly solvable models of nonequilibrium physics. The…

Statistical Mechanics · Physics 2007-05-23 R. Bundschuh

We prove a duality between the asymmetric simple exclusion process (ASEP) with non-conservative open boundary conditions and an asymmetric exclusion process with particle-dependent hopping rates and conservative reflecting boundaries. This…

Probability · Mathematics 2023-06-27 Gunter M. Schütz

The purpose of this article is to describe the two approaches to compute exact formulas (which are amenable to asymptotic analysis) for the probability distribution of the current of particles past a given site in the asymmetric simple…

Probability · Mathematics 2013-03-13 Ivan Corwin

We describe some recently discovered connections between one-dimensional interacting particle models and Macdonald polynomials. The first such model is the multispecies asymmetric simple exclusion process (ASEP) on a ring, linked to the…

Combinatorics · Mathematics 2025-08-07 Olya Mandelshtam

We give an exact expression for the distribution of the position X(t) of a single second class particle in the asymmetric simple exclusion process (ASEP) where initially the second class particle is located at the origin and the first class…

Probability · Mathematics 2009-10-06 Craig A. Tracy , Harold Widom

The totally asymmetric simple exclusion process (TASEP) is a stochastic model for the unidirectional flow of interacting particles on a 1D-lattice that is much used in systems biology and statistical physics. Its master equation describes…

Dynamical Systems · Mathematics 2026-04-20 Kilian Pioch , Lars Grüne , Thomas Kriecherbauer , Michael Margaliot

We analyze the dynamical phases of the current-biased 1D and multi-lane open asymmetric simple exclusion processes (ASEP), using matrix product states and the density matrix renormalization group (DMRG) algorithm. In the 1D ASEP, we present…

Statistical Mechanics · Physics 2019-08-07 Phillip Helms , Ushnish Ray , Garnet Kin-Lic Chan

Exclusion processes in one dimension first appeared in the 70s and have since dragged much attention from communities in different domains: stochastic processes, out-of-equilibriums statistical physics, and more recently integrable systems.…

Statistical Mechanics · Physics 2023-01-11 Ali Zahra

Exclusive diffusion on a one-dimensional lattice is studied. In the model particles hop stochastically into both directions with different rates. At the ends of the lattice particles are injected and removed. The exact stationary…

Condensed Matter · Physics 2009-10-22 Sven Sandow

We study a continuous-space version of the totally asymmetric simple exclusion process (TASEP), consisting of interacting Brownian particles subject to a driving force in a periodic external potential. Particles are inserted at the leftmost…

Statistical Mechanics · Physics 2010-02-02 Jose Eduardo de Oliveira Rodrigues , Ronald Dickman

Non-equilibrium systems are often characterized by the transport of some quantity at a macroscopic scale, such as, for instance, a current of particles through a wire. The Asymmetric Simple Exclusion Process (ASEP) is a paradigm for…

Statistical Mechanics · Physics 2013-05-30 Mieke Gorissen , Alexandre Lazarescu , Kirone Mallick , Carlo Vanderzande

We consider the one-dimensional asymmetric simple exclusion process (ASEP) in which particles jump to the right at rate $p\in(1/2,1]$ and to the left at rate $1-p$, interacting by exclusion. In the initial state there is a finite region…

Probability · Mathematics 2008-08-20 Pablo A. Ferrari , Patricia Goncalves , James B. Martin

We consider a multi-species generalization of the totally asymmetric simple exclusion process (TASEP) with the simple hopping rule: for x and yth-class particles (x<y), the transition xy -> yx occurs with a rate independent from the values…

Statistical Mechanics · Physics 2012-08-28 Chikashi Arita , Arvind Ayyer , Kirone Mallick , Sylvain Prolhac

The asymmetric simple exclusion process (ASEP) on a one-dimensional lattice is a system of particles which jump at rates $p$ and $1-p$ (here $p>1/2$) to adjacent empty sites on their right and left respectively. The system is described on…

Condensed Matter · Physics 2009-10-30 B. Derrida , J. L. Lebowitz , E. R. Speer

The one-dimensional Asymmetric Exclusion Process (ASEP) is a paradigm for nonequilibrium dynamics, in particular driven diffusive processes. It is usually considered in a canonical ensemble in which the number of sites is fixed. We observe…

Statistical Mechanics · Physics 2016-08-31 R. A. Blythe , W. Janke , D. A. Johnston , R. Kenna

A totally asymmetric exclusion process on a ring with $\nu$ non-conserved internal degrees of freedom, where particles hop forward with a rate that depends on their internal state, has been studied. We show, using a mapping of the model to…

Statistical Mechanics · Physics 2010-11-16 Urna Basu , P. K. Mohanty

The spectrum of Hamiltonian (Markov matrix) of a multi-species asymmetric simple exclusion process on a ring is studied. The dynamical exponent concerning the relaxation time is found to coincide with the one-species case. It implies that…

Mathematical Physics · Physics 2009-09-01 Chikashi Arita , Atsuo Kuniba , Kazumitsu Sakai , Tsuyoshi Sawabe

We consider the biased card shuffling and the Asymmetric Simple Exclusion Process (ASEP) on the segment. We obtain the asymptotic of their mixing times: our result show that these two continuous-time Markov chains display cutoff. Our…

Probability · Mathematics 2019-05-09 Cyril Labbé , Hubert Lacoin

The totally asymmetric simple exclusion process with generalized update is a version of the discrete time totally asymmetric exclusion process with an additional inter-particle interaction that controls the degree of particle clustering.…

Statistical Mechanics · Physics 2024-03-21 Nadezhda Zh Bunzarova , Nina C Pesheva , Alexander M Povolotsky

We obtain an exact matrix product steady state for a class of multi species asymmetric simple exclusion process with impurities, under periodic boundary condition. Alongside the usual hopping dynamics, an additional flip dynamics is…

Statistical Mechanics · Physics 2023-03-17 Amit Kumar Chatterjee , Hisao Hayakawa
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