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Related papers: Structural relaxation in Morse clusters: Energy la…

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The notion of complex energy landscape underpins the intriguing dynamical behaviors in many complex systems ranging from polymers, to brain activity, to social networks and glass transitions. The spin glass state found in dilute magnetic…

Disordered Systems and Neural Networks · Physics 2017-07-19 Anjana Samarakoon , Taku J. Sato , Tianran Chen , Gai-Wei Chern , Junjie Yang , Israel Klich , Ryan Sinclair Haidong Zhou , Seung-Hun Lee

We present the study of the landscape structure of athermal soft spheres both as a function of the packing fraction and of the energy. We find that, on approaching the jamming transition, the number of different configurations available to…

Statistical Mechanics · Physics 2020-05-20 Claudia Artiaco , Paolo Baldan , Giorgio Parisi

We explore whether the topology of energy landscapes in chemical systems obeys any rules and what these rules are. To answer this and related questions we use several tools: (i)Reduced energy surface and its density of states, (ii)…

Materials Science · Physics 2015-05-14 Artem R. Oganov , Mario Valle

We analyse the relationship between dynamics and configuration space structure of Ising spin glass systems. The exact knowledge of the structure of the low--energy landscape is used to study the relaxation of the system by random walk in…

Disordered Systems and Neural Networks · Physics 2009-11-07 S. Kobe , J. Krawczyk

Clusters of spherical particles with isotropic attraction favour compact structures that maximise the number of energetically optimal nearest-neighbour interactions. In contrast, dipolar interactions lead to the formation of chains with a…

The energetics of transformation of a planar fragment of a graphite monolayer into a spherical cluster is studied. The path considered is that a flat cluster rolls up into a segment of a spherical shell. The energy landscape of the process…

Materials Science · Physics 2007-05-23 Slava V. Rotkin , Robert A. Suris

In this chapter the physical aspects of the global optimization of the geometry of atomic clusters are elucidated. In particular, I examine the structural principles that determine the nature of the lowest-energy structure, the physical…

Condensed Matter · Physics 2007-05-23 Jonathan Doye

We analyze the structure of the energy landscape of a well-relaxed 1000-atom model of amorphous silicon using the activation-relaxation technique (ART nouveau). Generating more than 40,000 events starting from a single minimum, we find that…

Materials Science · Physics 2009-11-10 Francis Valiquette , Normand Mousseau

Describing the complex landscape of infinite-dimensional free energy is generally a challenging problem. This difficulty arises from the existence of numerous minimizers and, consequently, a vast number of saddle points. These factors make…

Soft Condensed Matter · Physics 2025-07-15 Keiichiro Kagawa , Takeshi Watanabe , Yasumasa Nishiura

Locating the global minimum of a complex potential energy surface is facilitated by considering a homotopy, namely a family of surfaces that interpolate continuously from an arbitrary initial potential to the system under consideration.…

Computational Physics · Physics 2009-11-07 J. S. Hunjan , S. Sarkar , R. Ramaswamy

We formally extend the energy landscape approach for the thermodynamics of liquids to account for saddle points. By considering the extensive nature of macroscopic potential energies, we derive the scaling behavior of saddles with system…

Soft Condensed Matter · Physics 2009-11-10 M. S. Shell , P. G. Debenedetti , A. Z. Panagiotopoulos

In the free energy landscape picture of glassy systems, the slow dynamics characteristic of these systems is believed to be due to the existence of a complicated free-energy landscape with many local minima. We show here that for a…

Soft Condensed Matter · Physics 2009-11-11 Sara Jabbari-Farouji , Gerard H. Wegdam , Daniel Bonn

The concept of potential energy landscapes is applied in many areas of science. We experimentally realize a random potential energy landscape (rPEL) to which colloids are exposed. This is achieved exploiting the interaction of matter with…

Optics · Physics 2016-07-11 J. Bewerunge , S. U. Egelhaaf

We report our studies of the potential energy surface (PES) of selected binary Lennard-Jones clusters. The effect of adding selected impurity atoms to a homogeneous cluster is explored. Inherent structures and transition states are found by…

Materials Science · Physics 2009-11-10 Dubravko Sabo , J. D. Doll , David L. Freeman

We study the global geometry of the energy landscape of a simple model of a self-gravitating system, the self-gravitating ring (SGR). This is done by endowing the configuration space with a metric such that the dynamical trajectories are…

Statistical Mechanics · Physics 2012-10-24 Bernardo Monechi , Lapo Casetti

Polymorphism rationalizes how processing can control the final structure of a material. The rugged free-energy landscape and exceedingly slow kinetics in the solid state have so far hampered computational investigations. We report for the…

Soft Condensed Matter · Physics 2020-07-24 Chan Liu , Jan Gerit Brandenburg , Omar Valsson , Kurt Kremer , Tristan Bereau

A phenomenological free energy model is proposed to describe the behavior of smectic liquid crystals, an intermediate phase that exhibits orientational order and layering at the molecular scale. Advantageous properties render the functional…

Soft Condensed Matter · Physics 2021-05-05 Jingmin Xia , Scott MacLachlan , Timothy J. Atherton , Patrick E. Farrell

Plenty of saddles on a multidimensional potential energy surface(PES) of two-dimensional microclusters, where atoms are interacting via Morse potential, are numerically located. The reaction paths emanating from the two types of the local…

Materials Science · Physics 2007-05-23 Yasushi Shimizu , Shin-ichi Sawada , Kensuke S. Ikeda

In order to efficiently explore the chemical space of all possible small molecules, a common approach is to compress the dimension of the system to facilitate downstream machine learning tasks. Towards this end, we present a data driven…

Biomolecules · Quantitative Biology 2024-01-23 Paula Mercurio , Di Liu

The magnetic relaxation processes in disordered two-dimensional ensembles of dipole-coupled magnetic nanoparticles are theoretically investigated by performing numerical simulations. The energy landscape of the system is explored by…

Materials Science · Physics 2009-11-13 G. M. Pastor , P. J. Jensen