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Direct reciprocity is a mechanism for the evolution of cooperation in repeated social interactions. According to this literature, individuals naturally learn to adopt conditionally cooperative strategies if they have multiple encounters…

Physics and Society · Physics 2023-11-07 Nikoleta E. Glynatsi , Alex McAvoy , Christian Hilbe

In living cells, biochemical reactions are catalyzed by specific enzymes and connect to one another by sharing substrates and products, forming complex networks. In our previous studies, we established a framework determining the responses…

Molecular Networks · Quantitative Biology 2017-09-06 Takashi Okada , Atsushi Mochizuki

The study of immune system aging, i.e. immunosenescence, is a relatively new research topic. It deals with understanding the processes of immunodegradation that indicate signs of functionality loss possibly leading to death. Even though it…

Artificial Intelligence · Computer Science 2010-07-05 Grazziela P. Figueredo , Uwe Aickelin , Amanda Whitbrook

Lymphocyte selection is a fundamental operation of adaptive immunity. In order to produce B-lymphocytes with a desired antigenic profile, a process of mutation-selection occurs in the germinal center, which is part of the lymph nodes. We…

Analysis of PDEs · Mathematics 2015-01-28 Vuk Milisic , Gilles Wainrib

From families to nations, what binds individuals in social groups is the degree to which they share beliefs, norms, and memories. While local clusters of communicating individuals can sustain shared memories and norms, communities…

Social and Information Networks · Computer Science 2017-05-23 Ida Momennejad , Ajua Duker , Alin Coman

The adaptive immune system relies on the diversity of receptors expressed on the surface of B and T-cells to protect the organism from a vast amount of pathogenic threats. The proliferation and degradation dynamics of different cell types…

Populations and Evolution · Quantitative Biology 2016-02-10 Jonathan Desponds , Thierry Mora , Aleksandra M. Walczak

Making neural networks remember over the long term has been a longstanding issue. Although several external memory techniques have been introduced, most focus on retaining recent information in the short term. Regardless of its importance,…

Machine Learning · Computer Science 2024-07-19 Sangjun Park , JinYeong Bak

We offer a very simple model of how collective memory may form. Agents keep signalling within neighbourhoods, and depending on how many support each signal, some signals "win" in that neighbourhood. By agents interacting between different…

Formal Languages and Automata Theory · Computer Science 2021-06-23 R. Ramanujam

Many social, technological and biological interactions involve network relationships whose outcome intimately depends on the structure of the network and on the strengths of the connections. Yet, although much information is now available…

Statistical Mechanics · Physics 2009-11-10 Guido Caldarelli , Fabrizio Coccetti , Paolo De Los Rios

Artificial immune system can be used to generate schedules in changing environments and it has been proven to be more robust than schedules developed using a genetic algorithm. Good schedules can be produced especially when the number of…

Neural and Evolutionary Computing · Computer Science 2010-07-05 Uwe Aickelin , Edmund Burke , Aniza Din

The characterization of the "most connected" nodes in static or slowly evolving complex networks has helped in understanding and predicting the behavior of social, biological, and technological networked systems, including their robustness…

Physics and Society · Physics 2010-10-21 Scott A. Hill , Dan Braha

In this paper we outline initial concepts for an immune inspired algorithm to evaluate price time series data. The proposed solution evolves a short term pool of trackers dynamically through a process of proliferation and mutation, with…

Artificial Intelligence · Computer Science 2010-07-05 William Wilson , Phil Birkin , Uwe Aickelin

In many body systems, constituents interact with each other, forming a recursive pattern of mutual interaction and giving rise to many interesting phenomena. Based upon concepts of the modern many body theory, a model for a generic many…

Soft Condensed Matter · Physics 2007-05-23 Zhen Ye

The adaptive immune system is a natural diagnostic and therapeutic. It recognizes threats earlier than clinical symptoms manifest and neutralizes antigen with exquisite specificity. Recognition specificity and broad reactivity is enabled…

Quantitative Methods · Quantitative Biology 2019-07-26 Alex J. Brown , Igor Snapkov , Rahmad Akbar , Milena Pavlović , Enkelejda Miho , Geir K. Sandve , Victor Greiff

Memory-based neural networks model temporal data by leveraging an ability to remember information for long periods. It is unclear, however, whether they also have an ability to perform complex relational reasoning with the information they…

The T cell arm of the adaptive immune system provides the host protection against unknown pathogens by discriminating between host and foreign material. This discriminatory capability is achieved by the creation of a repertoire of cells…

Biological Physics · Physics 2022-01-03 Kevin Ng Chau , Jason T. George , José N. Onuchic , Xingcheng Lin , Herbert Levine

During the last decade, network approaches became a powerful tool to describe protein structure and dynamics. Here, we describe first the protein structure networks of molecular chaperones, then characterize chaperone containing…

Molecular Networks · Quantitative Biology 2014-04-28 David M. Gyurko , Csaba Soti , Attila Stetak , Peter Csermely

In spite of its relevance to the origin of complex networks, the interplay between form and function and its role during network formation remains largely unexplored. While recent studies introduce dynamics by considering rewiring processes…

Physics and Society · Physics 2008-07-18 J. Poncela , J. Gomez-Gardenes , L. M. Floria , A. Sanchez , Y. Moreno

Our main tenet argues that the primary role of positive thymic selection and the resulting T cell population is the maintenance of a homeostatic equilibrium with self MHC-self peptide complexes. The homeostatic T cell repertoire can…

Molecular Networks · Quantitative Biology 2011-10-06 Tamas Szabados , Tibor Bakacs

Sequence memory is an essential attribute of natural and artificial intelligence that enables agents to encode, store, and retrieve complex sequences of stimuli and actions. Computational models of sequence memory have been proposed where…

Neural and Evolutionary Computing · Computer Science 2023-11-06 Hamza Tahir Chaudhry , Jacob A. Zavatone-Veth , Dmitry Krotov , Cengiz Pehlevan
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