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We propose sequential Monte Carlo (SMC) methods for sampling the posterior distribution of state-space models under highly informative observation regimes, a situation in which standard SMC methods can perform poorly. A special case is…

Computation · Statistics 2015-07-10 Pierre Del Moral , Lawrence M. Murray

Monte Carlo simulation has been performed in one-dimensional Lebwohl-Lasher model and two dimensional XY-model using the Wang-Landau and the Wang-Landau-Transition-Matrix Monte Carlo methods. Random walk has been performed in the…

Statistical Mechanics · Physics 2010-05-27 Shyamal Bhar , Soumen Kumar Roy

We introduce a parallel Wang-Landau method based on the replica-exchange framework for Monte Carlo simulations. To demonstrate its advantages and general applicability for simulations of complex systems, we apply it to different spin models…

Computational Physics · Physics 2013-05-27 Thomas Vogel , Ying Wai Li , Thomas Wüst , David P. Landau

Metastable structures in macromolecular and colloidal systems are non-equilibrium states that often have long lifetimes and cause difficulties in simulating equilibrium. In order to escape from the long-lived metastable states, we propose a…

Soft Condensed Matter · Physics 2011-06-09 Yuki Norizoe , Toshihiro Kawakatsu

To better understand the capture process by a nanopore, we introduce an efficient Kinetic Monte Carlo (KMC) algorithm that can simulate long times and large system sizes by mapping the dynamic of a point-like particle in a 3D spherically…

Biological Physics · Physics 2021-03-22 Le Qiao , Maxime Ignacio , Gary W. Slater

Random sequential adsorption of binary mixtures of extended objects on a two-dimensional triangular lattice is studied numerically by means of Monte Carlo simulations. The depositing objects are formed by self-avoiding random walks on the…

Statistical Mechanics · Physics 2009-11-13 I. Lončarević , Lj. Budinski-Petković , S. B. Vrhovac

Interacting particle systems with many degrees of freedom may undergo phase transitions to sustain atypical fluctuations of dynamical observables such as the current or the activity. This leads in some cases to symmetry-broken space-time…

Statistical Mechanics · Physics 2019-08-23 Carlos Pérez-Espigares , Pablo I. Hurtado

A Markov chain update scheme using a machine-learned flow-based generative model is proposed for Monte Carlo sampling in lattice field theories. The generative model may be optimized (trained) to produce samples from a distribution…

High Energy Physics - Lattice · Physics 2019-09-10 M. S. Albergo , G. Kanwar , P. E. Shanahan

A new projection method for a generic two-fluid model is presented in this work. Specifically, we extend the projection method, originally designed for single-phase variable density incompressible and compressible flows, to viscous…

Numerical Analysis · Mathematics 2025-01-17 Po-Yi Wu

Sampling all possible transition paths between two 3D states of a molecular system has various applications ranging from catalyst design to drug discovery. Current approaches to sample transition paths use Markov chain Monte Carlo and rely…

Quantitative Methods · Quantitative Biology 2024-05-29 Michael Plainer , Hannes Stärk , Charlotte Bunne , Stephan Günnemann

Stochastic nonlinear dynamical systems can undergo rapid transitions relative to the change in their forcing, for example due to the occurrence of multiple equilibrium solutions for a specific interval of parameters. In this paper, we…

Data Analysis, Statistics and Probability · Physics 2020-11-12 S. Baars , D. Castellana , F. W. Wubs , H. A. Dijkstra

We adapted the SWAP molecular dynamics algorithm for use in lattice Ising spin models. We dressed the spins with a randomly distributed length and we alternated long-range spin exchanges with conventional single spin flip Monte Carlo…

Statistical Mechanics · Physics 2025-10-14 Greivin Alfaro Miranda , Leticia F. Cugliandolo , Marco Tarzia

A numerical method for simulating three-phase flows with moving contact lines on arbitrarily complex surfaces is developed in the framework of lattice Boltzmann method. In this method, the immiscible three-phase flow is modeled through a…

Fluid Dynamics · Physics 2021-07-28 Sheng Li , Yang Lu , Fei Jiang , Haihu Liu

We present a multi-lattice kinetic Monte Carlo (kMC) approach that efficiently describes the atomistic dynamics of morphological transitions between commensurate structures at crystal surfaces. As an example we study the reduction of a…

Mesoscale and Nanoscale Physics · Physics 2015-01-09 Max J. Hoffmann , Matthias Scheffler , Karsten Reuter

Monte Carlo simulations and series expansion data for the energy, specific heat, magnetization and susceptibility of the 3-state Potts model on the square lattice are analyzed in the vicinity of the critical point in order to estimate…

Statistical Mechanics · Physics 2008-06-30 Lev N. Shchur , Bertrand Berche , Paolo Butera

We present a lattice Monte Carlo algorithm based on the one originally proposed by Maggs and Rossetto for simulating electrostatic interactions in inhomogeneous dielectric media. The original algorithm is known to produce attractive…

Soft Condensed Matter · Physics 2017-05-12 Xiaozheng Duan , Issei Nakamura , Zhen-Gang Wang

We present a formalism that allows for the direct manipulation and optimization of subspaces, circumventing the need to optimize individual states when using subspace methods. Using the determinant state mapping, we can naturally extend…

Quantum Physics · Physics 2026-04-29 Adrien Kahn , Luca Gravina , Filippo Vicentini

Discrete particle simulations are widely used to study large-scale particulate flows in complex geometries where particle-particle and particle-fluid interactions require an adequate representation but the computational cost has to be kept…

Computational Engineering, Finance, and Science · Computer Science 2017-11-02 Christoph Rettinger , Ulrich Rüde

In a seminal paper, Weitz showed that for two-state spin systems, such as the Ising and hardcore models from statistical physics, correlation decay on trees implies correlation decay on arbitrary graphs. The key gadget in Weitz's reduction…

Data Structures and Algorithms · Computer Science 2025-02-11 Kuikui Liu , Nitya Mani , Francisco Pernice

The finite lattice method of series expansion has been used to extend low-temperature series for the partition function, order parameter and susceptibility of the $3$-state Potts model on the simple cubic lattice to order $z^{43}$ and the…

High Energy Physics - Lattice · Physics 2009-10-22 A J Guttmann , I G Enting
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