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We discuss several algorithms for sampling from unnormalized probability distributions in statistical physics, but using the language of statistics and machine learning. We provide a self-contained introduction to some key ideas and…

Computation · Statistics 2025-05-05 Michael F. Faulkner , Samuel Livingstone

Variable selection in cluster analysis is important yet challenging. It can be achieved by regularization methods, which realize a trade-off between the clustering accuracy and the number of selected variables by using a lasso-type penalty.…

Methodology · Statistics 2016-12-23 Marbac Matthieu , Sedki Mohammed

We study 2-dimensional binary mixtures of parallel squares as well as of disks. A recent cluster algorithm allows us to establish an entropic demixing transition between a homogeneously packed fluid phase and a demixed phase of a…

Soft Condensed Matter · Physics 2009-10-31 Arnaud Buhot , Werner Krauth

We present a velocity-based Monte Carlo fluid solver that overcomes the limitations of its existing vorticity-based counterpart. Because the velocity-based formulation is more commonly used in graphics, our Monte Carlo solver can be readily…

Graphics · Computer Science 2024-05-01 Ryusuke Sugimoto , Christopher Batty , Toshiya Hachisuka

Percolation models with multiple percolating clusters have attracted much attention in recent years. Here we use Monte Carlo simulations to study bond percolation on $L_{1}\times L_{2}$ planar random lattices, duals of random lattices, and…

Statistical Mechanics · Physics 2016-08-31 Hsiao-Ping Hsu , Simon C. Lin , Chin-Kun Hu

A general framework for dealing with both linear regression and clustering problems is described. It includes Gaussian clusterwise linear regression analysis with random covariates and cluster analysis via Gaussian mixture models with…

Methodology · Statistics 2015-10-13 Giuliano Galimberti , Annamaria Manisi , Gabriele Soffritti

Collective behavior of self-propelled particles is observed on a microscale for swimmers such as sperm and bacteria as well as for protein filaments in motility assays. The properties of such systems depend both on their dimensionality and…

Soft Condensed Matter · Physics 2014-01-07 Masoud Abkenar , Kristian Marx , Thorsten Auth , Gerhard Gompper

We show that modularity, a quantity introduced in the study of networked systems, can be generalized and used in the clustering problem as an indicator for the quality of the solution. The introduction of this measure arises very naturally…

Statistical Mechanics · Physics 2009-11-11 L. Angelini , D. Marinazzo , M. Pellicoro , S. Stramaglia

We study the phase diagram of the site-diluted Ising model in a wide dilution range, through Monte Carlo simulations and Finite-Size Scaling techniques. Our results for the critical exponents and universal cumulants turn out to be…

Disordered Systems and Neural Networks · Physics 2008-12-18 H. G. Ballesteros , L. A. Fernandez , V. Martin-Mayor , A. Munoz Sudupe , G. Parisi , J. J. Ruiz-Lorenzo

The distribution $\mu_{cl}$ of a Poisson cluster process in $X=\mathbb{R}^{d}$ (with i.i.d. clusters) is studied via an auxiliary Poisson measure on the space of configurations in $\mathfrak{X}=\sqcup_{n} X^n$, with intensity measure…

Functional Analysis · Mathematics 2008-10-07 Leonid Bogachev , Alexei Daletskii

In this paper, we present a cluster algorithm for the simulation of hard spheres and related systems. In this algorithm, a copy of the configuration is rotated with respect to a randomly chosen pivot point. The two systems are then…

Statistical Mechanics · Physics 2008-02-03 Christophe Dress , Werner Krauth

The cluster algorithm in the fully frustrated Ising model on the square lattice is essentially different from the ones used in other systems. Thus its better understanding is particularly important for finding new lines of development.…

Condensed Matter · Physics 2009-10-22 Werner Kerler , Peter Rehberg

We apply the recently developed adaptive ensemble optimization technique to simulate dense Lennard-Jones fluids and a particle-solvent model by broad-histogram Monte Carlo techniques. Equilibration of the simulated fluid is improved by…

Statistical Mechanics · Physics 2007-05-23 Simon Trebst , Emanuel Gull , Matthias Troyer

We present a consensus Monte Carlo algorithm that scales existing Bayesian nonparametric models for clustering and feature allocation to big data. The algorithm is valid for any prior on random subsets such as partitions and latent feature…

Computation · Statistics 2020-02-26 Yang Ni , Yuan Ji , Peter Mueller

We apply a simple statistical mechanics cluster approximation for studying clustering in the Kern and Frenkel model of Janus fluids. The approach is motivated by recent Monte Carlo simulations work on the same model revealing that the vapor…

Soft Condensed Matter · Physics 2011-03-14 Riccardo Fantoni , Achille Giacometti , Francesco Sciortino , Giorgio Pastore

A system of coupled photonic cavities on a two-dimensional square lattice is systematically investigated using the stochastic series expansion quantum Monte Carlo method. The ground state phase diagram contains insulating phases with…

Other Condensed Matter · Physics 2008-08-18 Jize Zhao , Anders W. Sandvik , Kazuo Ueda

Monte Carlo simulations within the grand canonical ensemble are used to obtain the joint distribution of density and energy fluctuations $p_L(\rho,u)$ for two model fluids: a decorated lattice gas and a polymer system. In the near critical…

Condensed Matter · Physics 2009-10-22 Nigel B. Wilding , Marcus Mueller

Colloidal particles that are confined to an interface such as the air-water interface are an example of a two-dimensional fluid. Such dispersions have been observed to spontaneously form cluster and stripe morphologies in certain systems…

Soft Condensed Matter · Physics 2008-09-17 A. J. Archer

A microscopic model of adsorption in cluster forming systems with competing interaction is considered. The adsorption process is described by the master equation and modelled by a kinetic Monte Carlo method. The evolution of the particle…

Soft Condensed Matter · Physics 2021-09-07 E. Bildanau , V. Vikhrenko

We propose a method for Monte Carlo simulation of statistical physical models with discretized energy. The method is based on several ideas including the cluster algorithm, the multicanonical Monte Carlo method and its acceleration proposed…

Statistical Mechanics · Physics 2009-11-07 Chiaki Yamaguchi , Naoki Kawashima