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We introduce a model of proteins in which all of the key atoms in the protein backbone are accounted for, thus extending the Freely Rotating Chain model. We use average bond lengths and average angles from the Protein Databank as input…

Soft Condensed Matter · Physics 2009-09-29 Hamed Seyed-allaei

Percolation and jamming phenomena are investigated for random sequential deposition of rectangular needles on $d=2$ square lattices. Associated thresholds $p_c^{perc}$ and $p_c^{jam}$ are determined for various needle sizes. Their ratios…

Disordered Systems and Neural Networks · Physics 2009-10-31 N. Vandewalle , S. Galam , M. Kramer

In order to investigate the dependence on lattice size of several observables in percolation, the Hoshen-Kopelman algorithm was modified so that growing lattices could be simulated. By this way, when simulating a lattice of size L, lattices…

Statistical Mechanics · Physics 2009-11-11 Daniel Tiggemann

Communication networks, power grids, and transportation networks are all examples of networks whose performance depends on reliable connectivity of their underlying network components even in the presence of usual network dynamics due to…

Physics and Society · Physics 2020-06-26 Arman Mohseni-Kabir , Mihir Pant , Don Towsley , Saikat Guha , Ananthram Swami

The effects of density and viscosity fluctuations on the total stress balance are identified and used to create a new mean velocity transformation for compressible boundary layers. This work is enabled by an extensive database of direct…

Fluid Dynamics · Physics 2023-02-28 Han Lee , Pino Martin , Owen Williams

The modeling of the elastic properties of disordered or nanoscale solids requires the foundations of the theory of elasticity to be revisited, as one explores scales at which this theory may no longer hold. The only cases for which…

Materials Science · Physics 2007-05-23 I. Goldhirsch , C. Goldenberg

This paper exhibits a Monte Carlo study on site percolation using the Newmann-Ziff algorithm in distorted square and simple cubic lattices where each site is allowed to be directly linked with any other site if the euclidean separation…

Statistical Mechanics · Physics 2023-07-05 Sayantan Mitra , Ankur Sensharma

The results of investigations of main characteristics of a one-dimensional percolation theory (percolation threshold, critical exponents of correlation radius and specific heat, and free energy) are presented for the problem of bonds and…

Disordered Systems and Neural Networks · Physics 2011-01-25 Mariya Bureeva , Vladimir Udodov

We study how the rigidity transition in a triangular lattice changes as a function of anisotropy by preferentially filling bonds on the lattice in one direction. We discover that the onset of rigidity in anisotropic spring networks arises…

Spatial heterogeneity in the elastic properties of soft random solids is investigated via a two-pronged approach. First, a nonlocal phenomenological model for the elastic free energy is examined. This features a quenched random kernel,…

Disordered Systems and Neural Networks · Physics 2011-12-06 Xiaoming Mao , Paul M. Goldbart , Xiangjun Xing , Annette Zippelius

Disordered networks of fragile elastic elements have been proposed as a model for inner porous regions of large bones [Gunaratne et.al., cond-mat/0009221]. In numerical studies, weakening of such networks is seen to be accompanied by…

Soft Condensed Matter · Physics 2009-11-07 Gemunu H. Gunaratne

We analytically study bond percolation on hyperbolic lattices obtained by tiling a hyperbolic plane with constant negative Gaussian curvature. The quantity of our main concern is $p_{c2}$, the value of occupation probability where a unique…

Statistical Mechanics · Physics 2013-01-01 Junghoon F. Lee , Seung Ki Baek

In this paper we consider independent site percolation in a triangulation of $\mathbb{R}^2$ given by adding $\sqrt{2}$-long diagonals to the usual graph $\mathbb{Z}^2$. We conjecture that $p_c=\frac{1}{2}$ for any such graph, and prove it…

Probability · Mathematics 2017-04-18 Leonardo T. Rolla

We study critical site percolation on the triangular lattice. We find the difference of the probabilities of having a percolation interface to the right and to the left of two given points in the scaling limit. This generalizes both Cardy's…

Probability · Mathematics 2025-04-22 Mikhail Khristoforov , Mikhail Skopenkov , Stanislav Smirnov

We summarize several decades of work in finding values for the percolation threshold p_c for site percolation on the square lattice, the universal correction-to-scaling exponent Omega, and the susceptibility amplitude ratio C^+/C^-, in two…

Disordered Systems and Neural Networks · Physics 2015-03-19 Robert M. Ziff

Lattices that can be represented in a kagome-like form are shown to satisfy a universal percolation criticality condition, expressed as a relation between P_3, the probability that all three vertices in the triangle connect, and P_0, the…

Disordered Systems and Neural Networks · Physics 2009-11-13 Robert M. Ziff , Hang Gu

The present work is essentially concerned with the development of statistical theory for the low temperature dislocation glide in concentrated solid solutions where atom-sized obstacles impede plastic flow. In connection with such a…

Statistical Mechanics · Physics 2015-05-13 Laurent Proville

The divergence of the correlation length $\xi$ at criticality is an important phenomenon of percolation in two-dimensional systems. Substantial speed-ups to the calculation of the percolation threshold and component distribution have been…

Physics and Society · Physics 2020-01-22 Michael M. Danziger , Bnaya Gross , Sergey V. Buldyrev

In Part I of this contribution, a systematic coarse-grained description of the dynamics of a weakly-bending semiflexible polymer was developed. Here, we discuss analytical solutions of the established deterministic partial…

Soft Condensed Matter · Physics 2007-12-04 Oskar Hallatschek , Erwin Frey , Klaus Kroy

Many mechanical structures, both engineered and biological, combine heavy rigid elements such as bones and beams with lightweight flexible ones such as cables and membranes. These are referred to as tensegrities, reflecting that cables can…

Soft Condensed Matter · Physics 2025-08-27 Vishal Sudhakar , William Stephenson , James P. McInerney , D. Zeb Rocklin
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