English
Related papers

Related papers: Solution of the Master Equation for Bak-Sneppen Mo…

200 papers

We propose a model based on coupled multiplicative stochastic processes to understand the dynamics of competing species in an ecosystem. This process can be conveniently described by a Fokker-Planck equation. We provide an analytical…

Populations and Evolution · Quantitative Biology 2012-03-13 Simone Pigolotti , Alessandro Flammini , Amos Maritan

We describe a simple model of evolution which incorporates the branching and extinction of species lines, and also includes abiotic influences. A first principles approach is taken in which the probability for speciation and extinction are…

adap-org · Physics 2008-02-03 D. A. Head , G. J. Rodgers

The idea of this review is to connect the different models of evolution to those of biological ageing through Darwin's theory. We start with the Eigen model of quasispecies for microevolution, then introduce the Bak-Sneppen model for…

Statistical Mechanics · Physics 2007-05-23 S. Moss de Oliveira , Domingos Alves , J. S. Sa Martins

Multi-species reaction-diffusion systems, with nearest-neighbor interaction on a one-dimensional lattice are considered. Necessary and sufficient constraints on the interaction rates are obtained, that guarantee the closedness of the time…

Condensed Matter · Physics 2009-11-07 Amir Aghamohammadi , Masoud Alimohammadi , Mohammad Khorrami

We investigate a model of evolving random network, introduced by us previously {[}{\it Phys. Rev. Lett.} {\bf 83}, 5587 (1999){]} . The model is a generalization of the Bak-Sneppen model of biological evolution, with the modification that…

Statistical Mechanics · Physics 2009-10-31 Frantisek Slanina , Miroslav Kotrla

We derive stochastic master equations for a quantum system interacting with a Bose field prepared in a superposition of continuous-mode coherent states. To determine a conditional evolution of the quantum system we use a collision model…

Quantum Physics · Physics 2020-02-11 Anita Dabrowska

A dynamical model of an ecological community is analyzed within a "mean-field approximation" in which one of the species interacts with the combination of all of the other species in the community. Within this approximation the model may be…

Adaptation and Self-Organizing Systems · Physics 2009-10-31 Alan McKane , David Alonso , Ricard V. Sole

The main topic of this thesis is the analysis of evolution equations reflecting issues in ecology and population dynamics. In mathematical modelling, the impact of environmental elements and the interaction between species is read into the…

Analysis of PDEs · Mathematics 2021-03-08 Elisa Affili

The evolution of states of a spatial ecological model is studied. The model describes an infinite population of point entities placed in $\mathbb{R}^d$ which reproduce themselves at distant points (disperse) and die with rate that includes…

Dynamical Systems · Mathematics 2015-12-22 Yuri Kondratiev , Yuri Kozitsky

We study here the Bak and Sneppen model, a prototype model for the study of Self-Organized Criticality. In this model several species interact and undergo extinction with a power law distribution of activity bursts. Species are defined…

Statistical Mechanics · Physics 2007-05-23 G. Caldarelli , M. Felici , A. Gabrielli , L. Pietronero

The exact fermion master equation previously obtained in [Phys. Rev. B \textbf{78}, 235311 (2008); New J. Phys. \textbf{12}, 083013 (2010)] describes the dynamics of quantum states of a principal system of fermionic particles under the…

Mesoscale and Nanoscale Physics · Physics 2015-03-19 Matisse Wei-Yuan Tu , Jian-Heng Liu , Wei-Min Zhang

The spin market model [S. Bornholdt, Int.J.Mod.Phys. C 12 (2001) 667] is extended into co-evolutionary version, where strategies of interacting and competitive traders are represented by local and global couplings between the nodes of…

Adaptation and Self-Organizing Systems · Physics 2009-11-11 D. Horvath , Z. Kuscsik , M. Gmitra

See the updated version arXiv:nlin/0111028.

Adaptation and Self-Organizing Systems · Physics 2010-09-08 Chaohong Lee , Xiwen Zhu , Kelin Gao

We consider a class of stochastic processes modeling binary interactions in an N-particle system. Examples of such systems can be found in the modeling of biological swarms. They lead to the definition of a class of master equations that we…

Probability · Mathematics 2014-04-08 Eric Carlen , Pierre Degond , Bernt Wennberg

We study generic behavior of solutions to a large class of evolution equations. The methods are applied to Schrodinger evolution on the circle.

Analysis of PDEs · Mathematics 2009-08-18 Sergey A. Denisov

Biochemical processes typically involve many chemical species, some in abundance and some in low molecule numbers. Here we first identify the rate constant limits under which the concentrations of a given set of species will tend to…

Quantitative Methods · Quantitative Biology 2016-01-20 Stephen Smith , Claudia Cianci , Ramon Grima

We consider a new approach to the description of the collective behavior of complex systems of mathematical biology based on the evolution equations for observables of such systems. This representation of the kinetic evolution seems, in…

Soft Condensed Matter · Physics 2020-07-07 V. I. Gerasimenko

We propose a class of evolutionary models that involves an arbitrary exchangeable process as the breeding process and different selection schemes. In those models, a new genome is born according to the breeding process, and then a genome is…

Neural and Evolutionary Computing · Computer Science 2020-08-25 Jüri Lember , Chris Watkins

We present numerical results based on a simplified ecological system in evolution, showing features of extinction similar to that claimed for the biosystem on Earth. In the model each species consists of a population in interaction with the…

adap-org · Physics 2009-10-28 Guillermo Abramson

We considered a stochastic version of the Bak-Sneppen model (SBSM) of ecological evolution where the the number $M$ of sites mutated in a mutation event is restricted to only two. Here the mutation zone consists of only one site and this…

Statistical Mechanics · Physics 2009-09-16 S. S. Manna