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Related papers: Diffusion on a stepped substrate

200 papers

We study the influence of the boundary conditions at the solid liquid interface on diffusion in a confined fluid. Using an hydrodynamic approach, we compute numerical estimates for the diffusion of a particle confined between two planes.…

Materials Science · Physics 2015-06-25 Anthony Saugey , Laurent Joly , Christophe Ybert , Jean-Louis Barrat , Lyderic Bocquet

We perform a kinetic Monte Carlo simulation study of a model of thin film deposition of a two-component mixture in which the activation energy for diffusion of an adatom is additive over its nearest neighbors and in which the interactions…

Materials Science · Physics 2021-06-11 Tung B. T. To , Fábio D. A. Aarão Reis

The deposition of nanometer-scale particles is of significant interest in various industrial processes. While these particles offer several advantages, their deposition can have detrimental effects, such as reducing the heat transfer…

Fluid Dynamics · Physics 2025-02-19 A. K. Nayak , A. Singh , M. Mesgarpour , M. S. Shadloo

We present the detailed analysis of the diffusive transport of spatially inhomogeneous fluid mixtures and the interplay between structural and dynamical properties varying on the atomic scale. The present treatment is based on different…

Mesoscale and Nanoscale Physics · Physics 2011-05-19 Umberto Marini Bettolo Marconi , Simone Melchionna

Heterogeneous media diffusion is often described using position-dependent diffusion coefficients and estimated indirectly through mean squared displacement in experiments. This approach may overlook other mechanisms and their interaction…

Statistical Mechanics · Physics 2023-09-11 Haroldo V. Ribeiro , Angel A. Tateishi , Ervin K. Lenzi , Richard L. Magin , Matjaz Perc

Motivated by recent research of Nikitin et al. (J.Phys.D vol. 49, 055301(2009)), we examine the effects of interatomic interactions on adatom surface diffusion. By using a mean-field approach in the random walk problem, we derive a…

Statistical Mechanics · Physics 2011-05-17 Yuri B. Gaididei , Vadim M. Loktev , Anton G. Naumovets , Anatoly G. Zagorodny

We investigated the energy transfer from active enzymes to their surroundings in crowded environments by measuring the diffusion of passive microscopic tracers in active solutions of ficoll and glycerol. Despite observing lower rates of…

Diffusion of molecules in cells plays an important role in providing a biological reaction on the surface by finding a target on the membrane surface. The water retardation (slow diffusion) near the target assists the searching molecules to…

Statistical Mechanics · Physics 2015-09-02 Takuma Akimoto , Kazuhiko Seki

Enhanced diffusion, which describes the accelerated spread of passive scalars due to the interaction between advection and molecular diffusion, has been extensively studied in simplified geometries, such as uniform shear and radial flows.…

Analysis of PDEs · Mathematics 2024-11-04 Rômulo Damasclin Chaves dos Santos , Jorge Henrique de Oliveira Sales

Burton-Cabrera-Frank (BCF) theory has proven to be a versatile framework to relate surface morphology and dynamics during crystal growth to the underlying mechanisms of adatom diffusion and attachment at steps. For an important class of…

The impact of surface reflection upon transmission through and energy distributions within random media has generally been described in terms of the boundary extrapolation lengths $z_b, z_b'$ at the input and output end of an open sample,…

Disordered Systems and Neural Networks · Physics 2017-08-02 Xiaojun Cheng , Chushun Tian , Zachary Lowell , Liyi Zhao , Azriel Z. Genack

The effect of conformational fluctuations of modular macromolecules, such as enzymes, on their diffusion properties is addressed using a simple generic model of an asymmetric dumbbell made of two hydrodynamically coupled subunits. It is…

Soft Condensed Matter · Physics 2017-11-22 Pierre Illien , Tunrayo Adeleke-Larodo , Ramin Golestanian

We present analytical results for the biased diffusion of particles moving under a constant force in a randomly layered medium. The influence of this medium on the particle dynamics is modeled by a piecewise constant random force. The…

Statistical Mechanics · Physics 2010-02-10 S. I. Denisov , H. Kantz

Collective diffusion coefficient in a two-dimensional lattice gas on a nonhomogeneous substrate is investigated using variational approach. Particles reside at adsorption sites with different well depths potentials and jump randomly between…

Statistical Mechanics · Physics 2009-11-13 F Krzyzewski , Magdalena A. Zaluska-Kotur

Enzymes have been shown to diffuse faster in the presence of their reactants. Recently, we revealed new insights into this process of enhanced diffusion using single-particle tracking (SPT) with total internal reflection fluorescence (TIRF)…

Biological Physics · Physics 2021-01-01 Mengqi Xu , W. Benjamin Rogers , Wylie W. Ahmed , Jennifer L. Ross

In this Letter, we present results of an extensive Monte Carlo study of the O/W(110) system under non-equilibrium conditions. We study the mean square displacements and long wavelength density fluctuations of adatoms. From these quantities,…

Condensed Matter · Physics 2009-10-28 I. Vattulainen , J. Merikoski , T. Ala-Nissila , S. C. Ying

The properties of a particle diffusing on a one-dimensional lattice where at each site a random barrier and a random trap act simultaneously on the particle are investigated by numerical and analytical techniques. The combined effect of…

Condensed Matter · Physics 2009-10-28 Achille Giacometti , K. P. N. Murthy

Theoretical analysis of random walk on percolation lattices has predicted that, at the occupied site concentrations of above the threshold value, a characteristic crossover between an initial sub-diffusion to a final classical diffusion…

Cellular Automata and Lattice Gases · Physics 2010-01-19 Mehrdad Ghaemi , Nasrollah Rezaei-Ghaleh , Yazdan Asgari

We study diffusion of (fluorescently) tagged hard-core interacting particles of finite size in a finite one-dimensional system. We find an exact analytical expression for the tagged particle probability density using a coordinate…

Soft Condensed Matter · Physics 2009-11-13 Ludvig Lizana , Tobias Ambjörnsson

Substrate strain mediated adatom configurations on Cu<111> surfaces have been simulated in a coverage range up to nearly 1 monolayer. Interacting adatoms occupy positions on a triangular lattice in two dimensions. The elastic interaction is…

Materials Science · Physics 2013-01-30 Wolfgang Kappus