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We propose a theoretical model for species that is focused on intrinsic organization and processes. Specifically, we regard species to be networks of organisms integrated by reproductive mechanisms (e.g., conjugation, meiosis, syngamy)…

Populations and Evolution · Quantitative Biology 2008-08-13 David Kizirian , Maureen A. Donnelly

It has been proposed that adaptation in complex systems is optimized at the critical boundary between ordered and disordered dynamical regimes. Here, we review models of evolving dynamical networks that lead to self-organization of network…

Adaptation and Self-Organizing Systems · Physics 2008-11-07 Thimo Rohlf , Stefan Bornholdt

Researchers have proposed that the distinction between so-called "simple" and "complex" societies can be expressed by an increase in the number of levels at which functional organization, interaction, and thus selection, operate. In spite…

adap-org · Physics 2007-05-23 Carl Lipo , Mark Madsen

We consider the Bernoulli percolation model in a finite box and we introduce an automatic control of the percolation probability, which is a function of the percolation configuration. For a suitable choice of this automatic control, the…

Probability · Mathematics 2022-01-21 Raphaël Cerf , Nicolas Forien

It has long been argued that neural networks have to establish and maintain a certain intermediate level of activity in order to keep away from the regimes of chaos and silence. Strong evidence for criticality has been observed in terms of…

Disordered Systems and Neural Networks · Physics 2012-12-14 Matthias Rybarsch , Stefan Bornholdt

Assessment of replicability is critical to ensure the quality and rigor of scientific research. In this paper, we discuss inference and modeling principles for replicability assessment. Targeting distinct application scenarios, we propose…

Methodology · Statistics 2021-05-11 Yi Zhao , Xiaoquan Wen

We consider the links between consistent and approximate descriptions of the quantum-classical systems, i.e. systems are composed of two interacting subsystems, one of which behaves almost classically while the other requires a quantum…

Quantum Physics · Physics 2010-04-27 V. I. Gerasimenko

A popular theory of self-organized criticality relates the critical behavior of driven dissipative systems to that of systems with conservation. In particular, this theory predicts that the stationary density of the abelian sandpile model…

Probability · Mathematics 2010-09-22 Anne Fey , Lionel Levine , David B. Wilson

We try to design a simple model exhibiting self-organized criticality, which is amenable to a rigorous mathematical analysis. To this end, we modify the generalized Ising Curie-Weiss model by implementing an automatic control of the inverse…

Probability · Mathematics 2016-02-10 Raphaël Cerf , Matthias Gorny

The Bak-Sneppen model of self-organized biological evolution of an infinite ecosystem of randomly interacting species is represented in terms of an infinite set of variables which can be considered as an analog to the set of integrals of…

Statistical Mechanics · Physics 2009-10-31 Yu. M. Pis'mak

Recent investigations have provided important insights into the complex structure and dynamics of collectively moving flocks of living organisms. Two intriguing observations are, scale-free correlations in the velocity fluctuations, in the…

Biological Physics · Physics 2022-03-22 Kunal Bhattacharya , Abhijit Chakraborty

A population of heterogenous agents compeeting through a minority rule is investigated. Agents which frequently loose are selected for evolution by changing their strategies. The stationary composition of the population resulting for this…

Disordered Systems and Neural Networks · Physics 2009-10-31 Alexei Vazquez

We incorporate the generic hierarchical architecture of foodwebs into a "{\it unified}" model that describes both "micro" and "macro" evolutions within a single theoretical framework. This model describes the "micro" -evolution in detail by…

Statistical Mechanics · Physics 2009-11-10 Debashish Chowdhury , Dietrich Stauffer

Measurement in biological systems became a subject of concern as a consequence of numerous reports on limited reproducibility of experimental results. To reveal origins of this inconsistency, we have examined general features of biological…

Other Quantitative Biology · Quantitative Biology 2017-04-03 Dalibor Štys , Jan Urban , Renata Rychtáriková , Anna Zhyrova , Petr Císař

A novel mechanism for the generation of self-organized criticality (SOC) is discussed in terms of the coupled-vibration model where the total system is forced under the uniform expansion of the Hubble type. This system shows a robust SOC…

Adaptation and Self-Organizing Systems · Physics 2007-05-23 Akira Iwamoto , Shinpei Chikazumi

We discuss the relation between self-organized criticality and depinning transitions by mapping sandpile models to equations that describe driven interfaces in random media. This equivalence yields a continuum description and gives insight…

Statistical Mechanics · Physics 2007-05-23 K. B. Lauritsen , M. J. Alava

The process of evolutionary emergence of purposeful adaptive behavior is investigated by means of computer simulations. The model proposed implies that there is an evolving population of simple agents, which have two natural needs: energy…

Neural and Evolutionary Computing · Computer Science 2007-05-23 Mikhail S. Burtsev , Vladimir G. Redko , Roman V. Gusarev

The evolution of complexity has been a central theme for Biology [2] and Artificial Life research [1]. It is generally agreed that complexity has increased in our universe, giving way to life, multi-cellularity, societies, and systems of…

Populations and Evolution · Quantitative Biology 2011-09-06 Carlos Gershenson , Tom Lenaerts

"Self-organization" has become a watchword in developmental biology, characterizing observations in which embryonic or induced stem cells of animals replicate morphological steps and outcomes seen in intact embryos. While the term was…

Tissues and Organs · Quantitative Biology 2021-11-24 Stuart A. Newman

We describe the construction of a conserved reaction-diffusion system that exhibits self-organized critical (avalanche-like) behavior under the action of a slow addition of particles. The model provides an illustration of the general…

Statistical Mechanics · Physics 2009-11-07 Romualdo Pastor-Satorras , Alessandro Vespignani
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