Related papers: Efficient and accurate three dimensional Poisson s…
Given a bounded domain $G \subset \R^d$, $d\geq 3$, we study smooth solutions of a linear parabolic equation with non-constant coefficients in $G$, which at the boundary have to $C^1$-match with some harmonic function in $\R^d \setminus…
The Poisson problem consists in finding an immersed surface $\Sigma\subset\mathbb{R}^m$ minimising Germain's elastic energy (known as Willmore energy in geometry) with prescribed boundary, boundary Gauss map and area which constitutes a…
A fast Poisson solver software package PoisFFT is presented. It is available as a free software licensed under the GNU GPL license version 3. The package uses the fast Fourier transform to directly solve the Poisson equation on a uniform…
This paper presents a grid-free simulation algorithm for the fully three-dimensional Vlasov--Poisson system for collisionless electron plasmas. We employ a standard particle method for the numerical approximation of the distribution…
This review discusses progress in efficient solvers which have as their foundation a representation in real space, either through finite-difference or finite-element formulations. The relationship of real-space approaches to linear-scaling…
In this paper we consider a nonlinear system of PDEs coupling the viscous Cahn-Hilliard-Oono equation with dynamic boundary conditions enjoying a similar structure on the boundary. After proving well-posedness of the corresponding initial…
The Poisson-Nernst-Planck (PNP) equations are fundamental for modeling ion transport in electrochemical systems, capturing the intricate interplay of concentration gradients, electric fields, and ion fluxes essential for applications such…
Implicit shape representation, such as SDFs, is a popular approach to recover the surface of a 3D shape as the level sets of a scalar field. Several methods approximate SDFs using machine learning strategies that exploit the knowledge that…
We describe the theory and implementation of a three-dimensional fluid dynamics code which we have developed for calculating the surface geometry and circulation currents in the secondaries of interacting binary systems. The main method is…
We prove the existence of ground states and high-energy solutions to the following Schr\"odinger-Poisson system \begin{align*} \begin{cases} - \Delta u + a(x) u + u v = 0,\newline \Delta v = u^2, \end{cases} \quad \text{in } \mathbb{R}^3,…
Poisson-Boltzmann (PB) model is one of the most popular implicit solvent models in biophysical modeling and computation. The ability of providing accurate and reliable PB estimation of electrostatic solvation free energy, $\Delta…
We provide an alternative Fourier analysis for multigrid applied to the Poisson problem in 1D, based on explicit derivation of spectra of the iteration matrix. The new Fourier analysis has advantages over the existing one. It is easy to…
The $P_1$--nonconforming quadrilateral finite element space with periodic boundary condition is investigated. The dimension and basis for the space are characterized with the concept of minimally essential discrete boundary conditions. We…
The main purpose of this paper is the study of the action that produces Poisson-gradient systems and their multiple periodical solutions. The Section 1 establishes the basic tools. The section 2 underlines conditions in which the action…
Common efficient schemes for the incompressible Navier-Stokes equations, such as projection or fractional step methods, have limited temporal accuracy as a result of matrix splitting errors, or introduce errors near the domain boundaries…
We present a general framework to compute upper and lower bounds for linear-functional outputs of the exact solutions of the Poisson equation based on reconstructions of the field variable and flux for both the primal and adjoint problems.…
In this paper a method is presented for evaluating the convolution of the Green's function for the Laplace operator with a specified function $\rho(\vec x)$ at all grid points in a rectangular domain $\Omega \subset {\mathrm R}^{d}$ ($d =…
A method to incorporate polarization charges at heterojunctions in compact models for transistors is presented. By including the polarization sheet charge as a Dirac delta function, the Poisson equation is solved to yield a closed equation…
We introduce and derive the Fourier-enhanced 3D electrostatic field solver of the gyrokinetic full-f PIC code PICLS. The solver makes use of a Fourier representation in one periodic direction of the domain to make the solving of the system…
We have developed efficient numerical algorithms for solving 3D steady-state Poisson-Nernst-Planck (PNP) equations with excess chemical potentials described by the classical density functional theory (cDFT). The coupled PNP equations are…