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Interconnected networks describe the dynamics of important systems in a wide range such as biological systems and electrical power grids. Some important features of these systems were successfully studied and understood through simplified…

Systems and Control · Computer Science 2016-03-18 Thanh Long Vu , Konstantin Turitsyn

Complex systems are commonly modeled using nonlinear dynamical systems. These models are often high-dimensional and chaotic. An important goal in studying physical systems through the lens of mathematical models is to determine when the…

Computational Geometry · Computer Science 2014-03-25 Jesse Berwald , Marian Gidea , Mikael Vejdemo-Johansson

Complex systems are often characterized by the interplay of multiple interconnected dynamical processes operating across a range of temporal scales. This phenomenon is widespread in both biological and artificial scenarios, making it…

Statistical Mechanics · Physics 2025-09-08 Giorgio Nicoletti , Daniel M. Busiello

We perform experiments with a granular system that consists of a collection of identical hollow spheres (ping-pong balls). Particles rest on a horizontal metallic grid and are confined within a circular region. Fluidization is achieved by…

A wide variety of complex systems are characterized by interactions of different types involving varying numbers of units. Multiplex hypergraphs serve as a tool to describe such structures, capturing distinct types of higher-order…

Physics and Society · Physics 2024-09-10 Quintino Francesco Lotito , Alberto Montresor , Federico Battiston

A primary challenge in understanding collective behavior is characterizing the spatiotemporal dynamics of the group. We employ topological data analysis to explore the structure of honeybee aggregations that form during trophallaxis, which…

Quantitative Methods · Quantitative Biology 2023-07-20 Golnar Gharooni-Fard , Morgan Byers , Varad Deshmukh , Elizabeth Bradley , Carissa Mayo , Chad Topaz , Orit Peleg

Many models in natural and social sciences are comprised of sets of inter-acting entities whose intensity of interaction decreases with distance. This often leads to structures of interest in these models composed of dense packs of…

Artificial Intelligence · Computer Science 2009-10-08 Pierrick Tranouez , Antoine Dutot

We address the problem of analyzing sets of noisy time-varying signals that all report on the same process but confound straightforward analyses due to complex inter-signal heterogeneities and measurement artifacts. In particular we…

Detecting repeated variable-length patterns, also called variable-length motifs, has received a great amount of attention in recent years. Current state-of-the-art algorithm utilizes fixed-length motif discovery algorithm as a subroutine to…

Data Structures and Algorithms · Computer Science 2018-02-15 Yifeng Gao , Jessica Lin

Self-assembly in the laboratory can now yield `information-rich' nanostructures in which each component is of a distinct type and has a defined spatial position. Ensuring the thermodynamic stability of such structures requires…

Biological Physics · Physics 2016-03-22 Stephen Whitelam

Several physical systems in condensed matter have been modeled approximating their constituent particles as hard objects. The hard spheres model has been indeed one of the cornerstones of the computational and theoretical description in…

Computational Physics · Physics 2015-05-13 Cristiano De Michele

This paper addresses the structure-and-motion problem, that requires to find camera motion and 3D struc- ture from point matches. A new pipeline, dubbed Samantha, is presented, that departs from the prevailing sequential paradigm and…

Computer Vision and Pattern Recognition · Computer Science 2015-10-30 Roberto Toldo , Riccardo Gherardi , Michela Farenzena , Andrea Fusiello

Parameter identification in pattern formation models from a single experimental snapshot is challenging, as traditional methods often require knowledge of initial conditions or transient dynamics -- data that are frequently unavailable in…

Analysis of PDEs · Mathematics 2025-04-04 Alexey Kazarnikov , Robert Scheichl , Irving R. Epstein , Heikki Haario , Anna Marciniak-Czochra

Understanding the dynamical behavior of complex systems is of exceptional relevance in everyday life, from biology to economy. In order to describe the dynamical organization of complex systems, existing methods require the knowledge of the…

Adaptation and Self-Organizing Systems · Physics 2017-03-07 Marco Fiorucci

Complex systems such as protein conformational fluctuations and supercooled liquids exhibit a long relaxation time and are considered to posses multiple relaxation times. We analytically obtain the exact correlation function for stochastic…

Soft Condensed Matter · Physics 2023-07-19 Takuma Akimoto , Eiji Yamamoto , Takashi Uneyama

A new approach is developed to integrate numerically the equations of motion for systems of interacting rigid polyatomic molecules. With the aid of a leapfrog framework, we directly involve principal angular velocities into the integration,…

Computational Physics · Physics 2007-05-23 Igor P. Omelyan

We present a brief survey of fluctuations and large deviations of particle systems with subextensive growth of the variance. These are called hyperuniform (or superhomogeneous) systems. We then discuss the relation between hyperuniformity…

Probability · Mathematics 2016-12-07 Subhro Ghosh , Joel L. Lebowitz

Change detection in heterogeneous multitemporal satellite images is a challenging and still not much studied topic in remote sensing and earth observation. This paper focuses on comparison of image pairs covering the same geographical area…

Computer Vision and Pattern Recognition · Computer Science 2017-02-13 Luigi Tommaso Luppino , Stian Normann Anfinsen , Gabriele Moser , Robert Jenssen , Filippo Maria Bianchi , Sebastiano Serpico , Gregoire Mercier

A time trajectory of an observable that fluctuates between two values (say, on and off), stemming from some unknown multi-substate kinetic scheme, is the output of many single molecule experiments. Here we show that when all successive…

Subcellular Processes · Quantitative Biology 2010-08-16 Ophir Flomenbom , Joseph Klafter , Attila Szabo

In this paper, we present a flexible and probabilistic framework for tracking topological features in time-varying scalar fields using merge trees and partial optimal transport. Merge trees are topological descriptors that record the…

Computational Geometry · Computer Science 2025-08-26 Mingzhe Li , Xinyuan Yan , Lin Yan , Tom Needham , Bei Wang