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Convolutional codes are error-correcting linear codes that utilize shift registers to encode. These codes have an arbitrary block size and they can incorporate both past and current information bits. DNA codes represent DNA sequences and…

Information Theory · Computer Science 2021-11-09 Paridhi Latawa , Nuh Aydin

Quantum error correction in general is experimentally challenging as it requires significant expansion of the size of quantum circuits and accurate performance of quantum gates to fulfill the error threshold requirement. Here we propose a…

Quantum Physics · Physics 2012-06-04 C. Shen , L. -M. Duan

In this work, we introduce a new type of linear classifier that is implemented in a chemical form. We propose a novel encoding technique which simultaneously represents multiple datasets in an array of microliter-scale chemical mixtures.…

Regenerating codes are a class of codes proposed for providing reliability of data and efficient repair of failed nodes in distributed storage systems. In this paper, we address the fundamental problem of handling errors and erasures during…

Information Theory · Computer Science 2015-03-20 K. V. Rashmi , Nihar B. Shah , Kannan Ramchandran , P. Vijay Kumar

Digital-analog is a universal quantum computing paradigm which employs the natural entangling Hamiltonian of the system and single-qubit gates as resources. Here, we study the stability of these protocols against Hamiltonian…

Quantum Physics · Physics 2026-03-10 Mikel Garcia-de-Andoin , Alatz Álvarez-Ahedo , Adrián Franco-Rubio , Mikel Sanz

Tandem duplication is the process of inserting a copy of a segment of DNA adjacent to the original position. Motivated by applications that store data in living organisms, Jain et al. (2017) proposed the study of codes that correct tandem…

Information Theory · Computer Science 2018-01-09 Yeow Meng Chee , Johan Chrisnata , Han Mao Kiah , Tuan Thanh Nguyen

In the context of optical signal processing, quantum and quantum-inspired machine learning algorithms have massive potential for deployment. One of the applications is in error correction protocols for the received noisy signals. In some…

A hypercomplex representation of DNA is proposed to facilitate comparison of DNA sequences with fuzzy composition. Using hypercomplex number representation, conventional sequence analysis method, such as, dot matrix analysis, dynamic…

Quantitative Methods · Quantitative Biology 2023-08-03 Jian-Jun Shu , Yajing Li

We propose an efficient protocol for digital quantum simulation of quantum chemistry problems and enhanced digital-analog quantum simulation of transport phenomena in biomolecules with superconducting circuits. Along these lines, we…

Quantum Physics · Physics 2016-06-23 L. García-Álvarez , U. Las Heras , A. Mezzacapo , M. Sanz , E. Solano , L. Lamata

Quantum technologies have shown immeasurable potential to effectively solve several information processing tasks such as prime number factorization, unstructured database search or complex macromolecule simulation. As a result of such…

Quantum Physics · Physics 2022-03-08 Josu Etxezarreta Martinez

Quantum error correction protocols will play a central role in the realisation of quantum computing; the choice of error correction code will influence the full quantum computing stack, from the layout of qubits at the physical level to…

Quantum Physics · Physics 2019-10-14 Joschka Roffe

The problem of designing codes for deletion-correction and synchronization has received renewed interest due to applications in DNA-based data storage systems that use nanopore sequencers as readout platforms. In almost all instances,…

Information Theory · Computer Science 2026-05-26 Yuan-Pon Chen , Olgica Milenkovic , João Ribeiro , Jin Sima

Quantum bits have technological imperfections. Additionally, the capacity of a component that can be implemented feasibly is limited. Therefore, distributed quantum computation is required to scale up quantum computers. This dissertation…

Quantum Physics · Physics 2017-04-11 Shota Nagayama

Optimizing the mRNA codon has an essential impact on gene expression for a specific target protein. It is an NP-hard problem; thus, exact solutions to such optimization problems become computationally intractable for realistic problem sizes…

Quantum Physics · Physics 2024-05-13 Hongfeng Zhang , Aritra Sarkar , Koen Bertels

After a brief introduction to both quantum computation and quantum error correction, we show how to construct quantum error-correcting codes based on classical BCH codes. With these codes, decoding can exploit additional information about…

Quantum Physics · Physics 2011-10-20 Markus Grassl , Willi Geiselmann , Thomas Beth

As the global need for large-scale data storage is rising exponentially, existing storage technologies are approaching their theoretical and functional limits in terms of density and energy consumption, making DNA based storage a potential…

Emerging Technologies · Computer Science 2021-10-12 Yotam Nahum , Eyar Ben-Tolila , Leon Anavy

Quantum information technologies demand highly accurate control over quantum systems. Achieving this requires control techniques that perform well despite the presence of decohering noise and other adverse effects. Here, we review a general…

Quantum Physics · Physics 2021-03-31 Edwin Barnes , Fernando A. Calderon-Vargas , Wenzheng Dong , Bikun Li , Junkai Zeng , Fei Zhuang

DNA, with remarkable properties of high density, durability, and replicability, is one of the most appealing storage media. Emerging DNA storage technologies use composite DNA letters, where information is represented by probability…

Information Theory · Computer Science 2025-03-26 Wenkai Zhang , Zhiying Wang

We construct a new class of quantum error-correcting codes for a bosonic mode which are advantageous for applications in quantum memories, communication, and scalable computation. These 'binomial quantum codes' are formed from a finite…

The interest in channel models in which the data is sent as an unordered set of binary strings has increased lately, due to emerging applications in DNA storage, among others. In this paper we analyze the minimal redundancy of binary codes…

Information Theory · Computer Science 2019-10-29 Jin Sima , Netanel Raviv , Jehoshua Bruck
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