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Conformations of partially or fully adsorbed semiflexible polymer chains are studied varying both contour length $L$, chain stiffness, $\kappa$, and the strength of the adsorption potential over a wide range. Molecular Dynamics simulations…

Soft Condensed Matter · Physics 2019-10-02 Andrey Milchev , Kurt Binder

The tube model is a central concept in polymer physics, and allows to reduce the complex many-filament problem of an entangled polymer solution to a single filament description. We investigate the probability distribution function of…

Soft Condensed Matter · Physics 2009-08-12 Hauke Hinsch , Erwin Frey

The persistence length of semiflexible polymers and one-dimensional fluid membranes is obtained from the renormalization of their bending rigidity. The renormalized bending rigidity is calculated using an exact real-space functional…

Statistical Mechanics · Physics 2012-05-02 Petra Gutjahr , Reinhard Lipowsky , Jan Kierfeld

We introduce a class of models of semiflexible polymers. The latter are characterized by a strong rigidity, the correlation length associated to the gradient-gradient correlations, called the persistence length, being of the same order as…

Probability · Mathematics 2011-08-25 Ostap Hryniv , Yvan Velenik

The mechanics of complex soft matter often cannot be understood in the classical physical frame of flexible polymers or rigid rods. The underlying constituents are semiflexible polymers, whose finite bending stiffness ($\kappa$) leads to…

Twist stiffness and an asymmetric bending stiffness of a polymer or a polymer bundle is captured by the elastic ribbon model. We investigate the effects a ring geometry induces to a thermally fluctuating ribbon, finding bend-bend coupling…

Biomolecules · Quantitative Biology 2008-02-07 Karen Alim , Erwin Frey

We consider a long, semiflexible polymer, with persistence length $P$ and contour length $L$, fluctuating in a narrow cylindrical channel of diameter $D$. In the regime $D\ll P\ll L$ the free energy of confinement $\Delta F$ and the length…

Soft Condensed Matter · Physics 2011-07-19 Yingzi Yang , Theodore W. Burkhardt , Gerhard Gompper

We consider an inextensible, semiflexible polymer or worm-like chain, with persistence length $P$ and contour length $L$, fluctuating in a cylindrical channel of diameter $D$. In the regime $D\ll P\ll L$, corresponding to a long, tightly…

Soft Condensed Matter · Physics 2015-05-19 Theodore W. Burkhardt , Yingzi Yang , Gerhard Gompper

The shape of semiflexible polymer rings is studied over their whole range of flexibility. Investigating the joint distribution of asphericity and nature of asphericity as well as their respective averages we find two distinct shape regimes…

Biomolecules · Quantitative Biology 2008-02-07 Karen Alim , Erwin Frey

We consider the continuum limit of a recently-introduced model for discretized thick polymers, or tubes. We address both analytically and numerically how the polymer thickness influences the decay of tangent-tangent correlations and find…

Statistical Mechanics · Physics 2016-08-31 D. Marenduzzo , C. Micheletti , H. Seyed-allaei , A. Trovato , A. Maritan

Mutual uncrossability of polymers generates topological constraints on their conformations and dynamics, which are generally described using the tube model. We imaged confinement tubes for individual polymers within a F-actin solution by…

Soft Condensed Matter · Physics 2009-08-20 M. Romanowska , H. Hinsch , N. Kirchgessner , M. Giesen , M. Degawa , B. Hoffmann , E. Frey , R. Merkel

We develop a theory describing density profile of the semi-flexible polymers absorbed onto a planar surface. The theoretical analysis consists of two parts. As a first part, we calculate a density profile of the adsorbed polymers by…

Soft Condensed Matter · Physics 2013-07-09 F. Semeriyanov , A. I. Chervanyov , G. Heinrich

We investigate the nonequilibrium tube length fluctuations during the relaxation of an initially stretched, entangled polymer chain. The time-dependent variance $\sigma^2$ of the tube length follows in the early-time regime a simple…

Statistical Mechanics · Physics 2009-11-07 Gunter M. Schuetz , Jaime E. Santos

Single partially confined collapsed polymers are studied in two dimensions. They are described by self-avoiding random walks with nearest-neighbour attractions below the $\Theta$-point, on the surface of an infinitely long cylinder. For the…

Statistical Mechanics · Physics 2009-11-07 Hsiao-Ping Hsu , Peter Grassberger

We study universal aspects of polymer conformations and transverse fluctuations for a single swollen chain characterized by a contour length $L$ and a persistence length $\ell_p$ in two dimensions (2D) and in three dimensions (3D) in the…

Soft Condensed Matter · Physics 2023-06-07 Jacob Bair , Swarnadeep Seth , Aniket Bhattacharya

Here, we provide an overview of theoretical approaches to semiflexible polymers and their networks. Such semiflexible polymers have large bending rigidities that can compete with the entropic tendency of a chain to crumple up into a random…

Soft Condensed Matter · Physics 2016-05-25 Chase P. Broedersz , Fred. C. MacKintosh

The equilibrium partitioning of linear polymer chains into flexible polymer networks is governed by intricate entropic constraints arising from configurational degrees of freedom of both chains and network, yet a quantitative understanding…

Soft Condensed Matter · Physics 2025-05-09 Haruki Takarai , Takashi Yasuda , Naoyuki Sakumichi , Takamasa Sakai

We study the permeability and selectivity (`permselectivity') of model membranes made of polydisperse polymer networks for molecular penetrant transport, using coarse-grained, implicit-solvent computer simulations. The permeability…

Soft Condensed Matter · Physics 2020-09-30 Won Kyu Kim , Richard Chudoba , Sebastian Milster , Rafael Roa , Matej Kanduc , Joachim Dzubiella

We present a theory for the elasticity of cross-linked stiff polymer networks. Stiff polymers, unlike their flexible counterparts, are highly anisotropic elastic objects. Similar to mechanical beams stiff polymers easily deform in bending,…

Soft Condensed Matter · Physics 2007-11-26 C. Heussinger , B. Schaefer , E. Frey

We present a numerical solution of the Worm-Like Chain (WLC) model for semi-flexible polymers. We display graphs for the end-to-end distance distribution and the force-extension relation expected from the model. We predict the expected…

Soft Condensed Matter · Physics 2009-11-07 Joseph Samuel , Supurna Sinha
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