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Probabilistic Boolean Networks (PBNs) have been previously proposed so as to gain insights into complex dy- namical systems. However, identification of large networks and of the underlying discrete Markov Chain which describes their…

Machine Learning · Computer Science 2018-01-24 Ifigeneia Apostolopoulou , Diana Marculescu

Stability is an important characteristic of network models that has implications for other desirable aspects such as controllability. The stability of a Boolean network depends on various factors, such as the topology of its wiring diagram…

Chaotic Dynamics · Physics 2024-07-09 Karthik Chandrasekhar , Claus Kadelka , Reinhard Laubenbacher , David Murrugarra

We investigate the propagation of perturbations in Boolean networks by evaluating the Derrida plot and modifications of it. We show that even small Random Boolean Networks agree well with the predictions of the annealed approximation, but…

Statistical Mechanics · Physics 2009-05-06 Christoph Fretter , Agnes Szejka , Barbara Drossel

We study quantum neural networks made by parametric one-qubit gates and fixed two-qubit gates in the limit of infinite width, where the generated function is the expectation value of the sum of single-qubit observables over all the qubits.…

Quantum Physics · Physics 2026-05-26 Filippo Girardi , Giacomo De Palma

Many research works deal with chaotic neural networks for various fields of application. Unfortunately, up to now these networks are usually claimed to be chaotic without any mathematical proof. The purpose of this paper is to establish,…

Neural and Evolutionary Computing · Computer Science 2016-08-23 Jacques M. Bahi , Jean-François Couchot , Christophe Guyeux , Michel Salomon

We consider the problem of studying the simulation capabilities of the dynamics of arbitrary networks of finite states machines. In these models, each node of the network takes two states 0 (passive) and 1 (active). The states of the nodes…

Computational Complexity · Computer Science 2021-08-02 Eric Goles , Andrew Adamatzky , Pedro Montealegre , Martín Ríos-Wilson

We evolve network topology of an asymmetrically connected threshold network by a simple local rewiring rule: quiet nodes grow links, active nodes lose links. This leads to convergence of the average connectivity of the network towards the…

Disordered Systems and Neural Networks · Physics 2009-10-31 Stefan Bornholdt , Thimo Rohlf

The observation of critical-like behavior in cortical networks represents a major step forward in elucidating how the brain manages information. Understanding the origin and functionality of critical-like dynamics, as well as their…

Neurons and Cognition · Quantitative Biology 2015-06-22 Paula Villa Martín , Paolo Moretti , Miguel A. Muñoz

Boolean functions on the space $F_{2}^m$ are not only important in the theory of error-correcting codes, but also in cryptography, where they occur in private key systems. In these two cases, the nonlinearity of these function is a main…

Number Theory · Mathematics 2015-06-26 Francois Rodier

Boolean networks are discrete dynamical systems for modeling regulation and signaling in living cells. We investigate a particular class of Boolean functions with inhibiting inputs exerting a veto (forced zero) on the output. We give…

Molecular Networks · Quantitative Biology 2014-09-05 Haleh Ebadi , Konstantin Klemm

We calculate analytically the critical connectivity $K_c$ of Random Threshold Networks (RTN) for homogeneous and inhomogeneous thresholds, and confirm the results by numerical simulations. We find a super-linear increase of $K_c$ with the…

Disordered Systems and Neural Networks · Physics 2009-11-13 Thimo Rohlf

We prove that nested canalizing functions are the minimum-sensitivity Boolean functions for any given activity ratio and we characterize the sensitivity boundary which has a nontrivial fractal structure. We further observe, on an extensive…

Molecular Networks · Quantitative Biology 2022-03-23 H. Coban , A. Kabakcioglu

We consider communication over a noisy network under randomized linear network coding. Possible error mechanism include node- or link- failures, Byzantine behavior of nodes, or an over-estimate of the network min-cut. Building on the work…

Information Theory · Computer Science 2007-11-27 Andrea Montanari , Ruediger Urbanke

This paper is a review dealing with the study of large size random recurrent neural networks. The connection weights are selected according to a probability law and it is possible to predict the network dynamics at a macroscopic scale using…

Mathematical Physics · Physics 2011-11-10 M. Samuelides , B. Cessac

Spin models of neural networks and genetic networks are considered elegant as they are accessible to statistical mechanics tools for spin glasses and magnetic systems. However, the conventional choice of variables in spin systems may cause…

Disordered Systems and Neural Networks · Physics 2012-12-10 Matthias Rybarsch , Stefan Bornholdt

Networks of the brain are composed of a very large number of neurons connected through a random graph and interacting after random delays that both depend on the anatomical distance between cells. In order to comprehend the role of these…

Mathematical Physics · Physics 2014-05-16 Cristobal Quininao , Jonathan Touboul

This paper studies the mathematical properties of collectively canalizing Boolean functions, a class of functions that has arisen from applications in systems biology. Boolean networks are an increasingly popular modeling framework for…

Discrete Mathematics · Computer Science 2023-06-07 Claus Kadelka , Benjamin Keilty , Reinhard Laubenbacher

It has been proposed that adaptation in complex systems is optimized at the critical boundary between ordered and disordered dynamical regimes. Here, we review models of evolving dynamical networks that lead to self-organization of network…

Adaptation and Self-Organizing Systems · Physics 2008-11-07 Thimo Rohlf , Stefan Bornholdt

Functional complex networks have meant a pivotal change in the way we understand complex systems, being the most outstanding one the human brain. These networks have classically been reconstructed using a frequentist approach that, while…

Data Analysis, Statistics and Probability · Physics 2018-03-14 Massimiliano Zanin , Seddik Belkoura , Javier Gomez , Cesar Alfaro , Javier Cano

The study of the interplay between the structure and dynamics of complex multilevel systems is a pressing challenge nowadays. In this paper, we use a semi-annealed approximation to study the stability properties of Random Boolean Networks…

Physics and Society · Physics 2012-10-31 Emanuele Cozzo , Alex Arenas , Yamir Moreno