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Related papers: Generic principles of active transport

200 papers

We present the detailed analysis of the diffusive transport of spatially inhomogeneous fluid mixtures and the interplay between structural and dynamical properties varying on the atomic scale. The present treatment is based on different…

Mesoscale and Nanoscale Physics · Physics 2011-05-19 Umberto Marini Bettolo Marconi , Simone Melchionna

In this article we present a comprehensive study of the totally asymmetric simple exclusion process with pausing particles (pTASEP), a model initially introduced to describe RNAP dynamics during transcription. We extend previous mean-field…

Statistical Mechanics · Physics 2025-07-31 Johannes Keisers , Lorenzo Vito Dal Zovo , Norbert Kern , Luca Ciandrini

We introduce a family of lattice-gas models of flocking, whose thermodynamically consistent dynamics admits a proper equilibrium limit at vanishing self-propulsion. These models are amenable to an exact coarse-graining which allows us to…

Statistical Mechanics · Physics 2024-09-27 Tal Agranov , Robert L. Jack , Michael E. Cates , Étienne Fodor

We address the dynamics of interacting particles on a disordered lattice formed by a random comb. The dynamics comprises that of the asymmetric simple exclusion process, whereby motion to nearest-neighour sites that are empty is more likely…

Statistical Mechanics · Physics 2025-06-03 Mrinal Sarkar , Shamik Gupta

We study the effect of disorder on the particle density evolution in a classical Hamiltonian driven lattice setup. If the disorder is localized within a finite sub-domain of the lattice, the emergence of strong tails in the density…

Chaotic Dynamics · Physics 2016-09-21 Thomas Wulf , Alexander Okupnik , Peter Schmelcher

We study numerically an inhomogeneous Ising lattice gas with short-range interactions where different sectors are in contact with thermal baths at different temperatures. Inside the different sectors particles jump to empty sites following…

Statistical Mechanics · Physics 2012-05-09 Linjun Li , Michel Pleimling

We show that active transport processes in biological systems can be understood through a local equilibrium description formulated at the mesoscale, the scale to describe stochastic processes. This new approach uses the method established…

Soft Condensed Matter · Physics 2007-05-23 S. Kjelstrup , J. M. Rubi , D. Bedeaux

Quasiperiodic behaviour is known to occur in systems with enforced quasiperiodicity or randomness, in either the lattice structure or the potential, as well as in periodically driven systems. Here, we present instead a setting where…

Mesoscale and Nanoscale Physics · Physics 2023-02-10 Cecilie Glittum , Antonio Štrkalj , Claudio Castelnovo

Using simulations and a simple mean-field theory, we investigate jamming transitions in a two-species lattice gas under non-equilibrium steady-state conditions. The two types of particles diffuse with different mobilities on a square…

Statistical Mechanics · Physics 2009-11-10 R. S. Hipolito , R. K. P. Zia , B. Schmittmann

We introduce and study a deterministic lattice model describing the motion of an infinite system of oppositely charged particles under the action of a constant electric field. As an application this model represents a traffic flow of cars…

Dynamical Systems · Mathematics 2009-11-13 Michael Blank

We study a conservative stochastic lattice dynamics (Kawasaki dynamics) in contact everywhere in the bulk with a heat bath. Particles interact via an Ising Hamiltonian and phase separation occurs at low temperature. We drive the system out…

Statistical Mechanics · Physics 2025-12-22 Meander Van den Brande , Kyosuke Adachi , Francois Huveneers

We extend the paradigmatic and versatile TASEP (Totally Asymmetric Simple Exclusion Process) for stochastic 1d transport to allow for two different particle species, each having specific entry and exit rates. We offer a complete mean-field…

Statistical Mechanics · Physics 2022-04-06 Pierre Bonnin , Ian Stansfield , M. Carmen Romano , Norbert Kern

With the aim of understanding the emergence of collective motion from local interactions of organisms in a "noisy" environment, we study biologically inspired, inherently non-equilibrium models consisting of self-propelled particles. In…

Biological Physics · Physics 2009-10-31 A. Czirok , T. Vicsek

We present a Monte Carlo study of a lattice gas driven out of equilibrium by a local hopping bias. Sites can be empty or occupied by one of two types of particles, which are distinguished by their response to the hopping bias. All particles…

Statistical Mechanics · Physics 2009-11-11 Edward Lyman , B. Schmittmann

We study topological transport in the steady state of a quantum particle hopping on a one-dimensional lattice in the presence of dissipation. The model exhibits a rich phase structure, with the average particle velocity in the steady state…

Mesoscale and Nanoscale Physics · Physics 2019-03-27 Michael J. Kastoryano , Mark S. Rudner

We introduce a class of one-dimensional lattice models in which a quantity, that may be thought of as an energy, is either transported from one site to a neighbouring one, or locally dissipated. Transport is controlled by a continuous bias…

Statistical Mechanics · Physics 2007-05-23 Eric Bertin

The paramagnetic phase of heavy fermion systems is investigated, using a non-perturbative local moment approach to the asymmetric periodic Anderson model within the framework of dynamical mean field theory. The natural focus is on the…

Strongly Correlated Electrons · Physics 2009-11-11 David E Logan , N S Vidhyadhiraja

A living cell's interior is one of the most complex and intrinsically dynamic systems, providing an elaborate interplay between cytosolic crowding and ATP-driven motion, which controls cellular functionality. Here, we investigated two…

Biological Physics · Physics 2019-11-14 P. Witzel , M. Götz , Y. Lanoiselée , T. Franosch , D. S. Grebenkov , D. Heinrich

We present a study of exclusion processes on networks as models for complex transport phenomena and in particular for active transport of motor proteins along the cytoskeleton. We argue that active transport processes on networks…

Statistical Mechanics · Physics 2013-08-12 I. Neri , N. Kern , A. Parmeggiani

Driven lattice gases as the ASEP are useful tools for the modeling of various stochastic transport processes carried out by self-driven particles, such as molecular motors or vehicles in road traffic. Often these processes take place in…

Statistical Mechanics · Physics 2017-09-20 Christoph Schiffmann , Cecile Appert-Rolland , Ludger Santen
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