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Related papers: Generic principles of active transport

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We introduce a multi-species lattice gas model for motor protein driven collective cargo transport on cellular filaments. We use this model to describe and analyze the collective motion of interacting vesicle cargoes being carried by…

Statistical Mechanics · Physics 2010-09-10 Sudipto Muhuri , Ignacio Pagonabarraga

Unlike equilibrium statistical mechanics, with its well-established foundations, a similar widely-accepted framework for non-equilibrium statistical mechanics (NESM) remains elusive. Here, we review some of the many recent activities on…

Statistical Mechanics · Physics 2015-05-30 T. Chou , K. Mallick , R. K. P. Zia

We consider the influence of disorder on the non-equilibrium steady state of a minimal model for intracellular transport. In this model particles move unidirectionally according to the \emph{totally asymmetric exclusion process} (TASEP) and…

Statistical Mechanics · Physics 2007-05-23 P. Pierobon , M. Mobilia , R. Kouyos , E. Frey

We investigate the non-equilibrium steady state of a one-dimensional (1D) lattice gas of dimers. The dynamics is described by a totally asymmetric exclusion process (TASEP) supplemented by attachment and detachment processes, mimicking…

Statistical Mechanics · Physics 2007-05-23 P. Pierobon , T. Franosch , E. Frey

We present a review of nonequilibrium phase transitions in mass-transport models with kinetic processes like fragmentation, diffusion, aggregation, etc. These models have been used extensively to study a wide range of physical problems. We…

Statistical Mechanics · Physics 2010-11-16 Gaurav P. Shrivastav , Varsha Banerjee , Sanjay Puri

Theoretical advances in the study of non-equilibrium phenomena are briefly reviewed with emphasis on steady state properties of one-dimensional driven lattice gases. The presentation is focused on the totally asymmetric simple-exclusion…

Statistical Mechanics · Physics 2008-03-19 J. G. Brankov , N. C. Pesheva , N. Zh. Bunzarova

Several theoretical models based on totally asymmetric simple exclusion process (TASEP) have been extensively utilized to study various non-equilibrium transport phenomena. Inspired by the the role of microtubule-transported vesicles in…

Statistical Mechanics · Physics 2021-02-03 Akriti Jindal , Atul Kumar Verma , Arvind Kumar Gupta

The transport phenomena of a nonequilibrium lattice gas system are investigated. We consider a simple system that consists of two particles interacting repulsively and the potential forces acting on these particles. Under an external…

Soft Condensed Matter · Physics 2009-11-11 Akinori Awazu

We study a minimal lattice model which describes bidirectional transport of "particles" driven along a one dimensional track, as is observed in microtubule based, motor protein driven bidirectional transport of cargo vesicles, lipid bodies…

Statistical Mechanics · Physics 2011-09-29 Sudipto Muhuri , Lenin Shagolsem , Madan Rao

This thesis focuses on the mechanisms of energy transport in multidimensional heterogeneous lattice models, studying in particular the case of the Klein-Gordon model of coupled anharmonic oscillators in one and two spatial dimensions. We…

Chaotic Dynamics · Physics 2021-04-26 Bob Senyange

Driven lattice gases serve as canonical models for investigating collective transport phenomena and properties of non-equilibrium steady states (NESS). Here we study one-dimensional transport with nearest-neighbor interactions both in…

Statistical Mechanics · Physics 2013-08-13 Marcel Dierl , Mario Einax , Philipp Maass

It is shown that intrinsically anisotropic non-equilibrium systems relaxing by a dynamic process exhibit universal critical behavior during their evolution toward non-equilibrium stationary states. An anisotropic scaling anzats for the…

Statistical Mechanics · Physics 2009-11-07 Ezequiel V. Albano , Gustavo Saracco

The asymmetric simple exclusion process with additional Langmuir kinetics, i.e. attachment and detachment in the bulk, is a paradigmatic model for intracellular transport. Here we study this model in the presence of randomly distributed…

Statistical Mechanics · Physics 2009-11-13 Philip Greulich , Andreas Schadschneider

This paper provides an introduction to some stochastic models of lattice gases out of equilibrium and a discussion of results of various kinds obtained in recent years. Although these models are different in their microscopic features, a…

Statistical Mechanics · Physics 2015-12-18 L. Bertini , A. De Sole , D. Gabrielli , G. Jona--Lasinio , C. Landim

The totally asymmetric simple exclusion process (TASEP) is a well studied example of far-from-equilibrium dynamics. Here, we consider a TASEP with open boundaries but impose a global constraint on the total number of particles. In other…

Statistical Mechanics · Physics 2008-07-02 D. A. Adams , B. Schmittmann , R. K. P. Zia

The totally asymmetric simple exclusion process (TASEP) is a paradigmatic stochastic model for non-equilibrium physics, and has been successfully applied to describe active transport of molecular motors along cytoskeletal filaments.…

Biological Physics · Physics 2018-07-25 Mareike Bojer , Isabella R. Graf , Erwin Frey

We explore the emergence of nonequilibrium collective motion in disordered non-thermal active matter when persistent motion and crowding effects compete, using simulations of a two-dimensional model of size polydisperse self-propelled…

Soft Condensed Matter · Physics 2022-07-27 Yann-Edwin Keta , Robert L. Jack , Ludovic Berthier

This Chapter contains an overview of the effects of nonlinear interactions in selected problems of non-equilibrium statistical mechanics. Most of the emphasis is put on open setups, where energy is exchanged with the environment. With…

Pattern Formation and Solitons · Physics 2020-06-23 Stefano Iubini , Stefano Lepri , Roberto Livi , Antonio Politi , Paolo Politi

The TASEP is a paradigmatic model from non-equilibrium statistical physics, which describes particles hopping along a lattice of discrete sites. The TASEP is applicable to a broad range of different transport systems, but does not consider…

Statistical Mechanics · Physics 2012-03-20 Chris A. Brackley , Luca Ciandrini , M. Carmen Romano

We introduce the totally asymmetric exclusion process with Langmuir kinetics (TASEP-LK) on a network as a microscopic model for active motor protein transport on the cytoskeleton, immersed in the diffusive cytoplasm. We discuss how the…

Statistical Mechanics · Physics 2013-03-01 I. Neri , N. Kern , A. Parmeggiani
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