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Open cellular solids usually possess random microstructures that may contain a characteristic length scale, such as the cell size. This gives rise to size dependent mechanical properties where large systems behave differently from small…

Materials Science · Physics 2018-01-03 Stefan Liebenstein , Stefan Sandfeld , Michael Zaiser

Networks are a widely used and efficient paradigm to model real-world systems where basic units interact pairwise. Many body interactions are often at play, and cannot be modelled by resorting to binary exchanges. In this work, we consider…

Adaptation and Self-Organizing Systems · Physics 2020-06-03 Timoteo Carletti , Duccio Fanelli , Sara Nicoletti

Transition points mark qualitative changes in the macroscopic properties of large complex systems. Explosive transitions, exhibiting properties of both continuous and discontinuous phase transitions, have recently been uncovered in network…

Physics and Society · Physics 2021-06-01 Nora Molkenthin , Malte Schröder , Marc Timme

The critical boundaries separating ordered from chaotic behavior in randomly wired S-state networks are calculated. These networks are a natural generalization of random Boolean nets and are proposed as on extended approach to genetic…

adap-org · Physics 2007-05-23 Ricard V. Sole , Bartolo Luque , Stuart Kauffman

Fibrous networks such as collagen are common in physiological systems. One important function of these networks is to provide mechanical stability for cells and tissues. At physiological levels of connectivity, such networks would be…

Soft Condensed Matter · Physics 2021-08-09 Sadjad Arzash , Jordan L. Shivers , Fred C. MacKintosh

This paper addresses analytical aspects of deterministic, continuous-time dynamical systems defined on networks. The goal is to model and analyze certain phenomena which must be framed beyond the context of networked dynamical systems,…

Dynamical Systems · Mathematics 2015-01-09 Ricardo Riaza

Scale-free networks are ubiquitous in social, biological and technological networked systems. Dynamic Scale-free networks and their synchronizations are important to understand and predict the behavior of social, biological and…

Social and Information Networks · Computer Science 2024-09-16 Rakib Hassan Pran

Dynamic gene-regulatory networks are complex since the number of potential components involved in the system is very large. Estimating dynamic networks is an important task because they compromise valuable information about interactions…

Methodology · Statistics 2012-05-15 Antonino Abbruzzo , Ernst Wit

Spatial self-organization emerges in distributed systems exhibiting local interactions when nonlinearities and the appropriate propagation of signals are at work. These kinds of phenomena can be modeled with different frameworks, typically…

Cell Behavior · Quantitative Biology 2016-11-23 Adriano Bonforti , Salva Duran-Nebreda , Raul Montañez , Ricard Solé

We investigate the role of connection density in an adaptive network model of chaotic units that dynamically rewire based on their internal states and local coherence. By systematically varying the network's connectivity density, we uncover…

Adaptation and Self-Organizing Systems · Physics 2025-08-19 Ramiro Plüss , Pablo Martín Gleiser

The spatial structure of the cell is highly organized at all levels: from small complexes and assemblies, to local nano- and micro-clusters, to global, micrometer scales across and between cells. We suggest that this multiscale spatial cell…

Biomolecules · Quantitative Biology 2013-08-06 Ruth Nussinov

Deep learning techniques have recently demonstrated broad success in predicting complex dynamical systems ranging from turbulence to human speech, motivating broader questions about how neural networks encode and represent dynamical rules.…

Cellular Automata and Lattice Gases · Physics 2020-01-20 William Gilpin

Deep connections are known to exist between scale-free networks and non-Gibbsian statistics. For example, typical degree distributions at the thermodynamical limit are of the form $P(k) \propto e_q^{-k/\kappa}$, where the $q$-exponential…

Statistical Mechanics · Physics 2016-06-28 S. G. A. Brito , L. R. da Silva , Constantino Tsallis

In this work, we investigate a model of an adaptive networked dynamical system, where the coupling strengths among phase oscillators coevolve with the phase states. It is shown that in this model the oscillators can spontaneously…

Disordered Systems and Neural Networks · Physics 2010-11-02 Menghui Li , Shuguang Guan , C. -H. Lai

We present a general computational theory of stem cell networks and their developmental dynamics. Stem cell networks are special cases of developmental control networks. Our theory generates a natural classification of all possible stem…

Other Quantitative Biology · Quantitative Biology 2016-07-18 Eric Werner

In this study we introduce and analyze the statistical structural properties of a model of growing networks which may be relevant to social networks. At each step a new node is added which selects 'k' possible partners from the existing…

Statistical Mechanics · Physics 2009-11-10 Laszlo Zalanyi , Gabor Csardi , Tamas Kiss , Mate Lengyel , Rebecca Warner , Jan Tobochnik , Peter Erdi

Complex networks describe a wide range of systems in nature and society, much quoted examples including the cell, a network of chemicals linked by chemical reactions, or the Internet, a network of routers and computers connected by physical…

Statistical Mechanics · Physics 2016-08-31 Reka Albert , Albert-Laszlo Barabasi

Flexible mechanical metamaterials possess repeating structural motifs that imbue them with novel, exciting properties including programmability, anomalous elastic moduli and nonlinear and robust response. We address such structures via…

Soft Condensed Matter · Physics 2020-03-11 Adrien Saremi , Zeb Rocklin

The study of temporal networks in discrete time has yielded numerous insights into time-dependent networked systems in a wide variety of applications. For many complex systems, however, it is useful to develop continuous-time models of…

Social and Information Networks · Computer Science 2021-02-10 Xinzhe Zuo , Mason A Porter

Network science has become an essential interdisciplinary tool for understanding complex biological systems. However, because these systems undergo continuous, often stimulus-driven changes in both structure and function, traditional static…

Molecular Networks · Quantitative Biology 2025-05-19 Abir Khazaal , Fatemeh Vafaee