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We extend the phase field crystal model to accommodate exact atomic configurations and vacancies by requiring the order parameter to be non-negative. The resulting theory dictates the number of atoms and describes the motion of each of…

Computational Physics · Physics 2009-02-10 Pak Yuen Chan , Nigel Goldenfeld , Jon Dantzig

Spatial diffusion of particles in periodic potential models has provided a good framework for studying the role of chaos in global properties of classical systems. Here a bidimensional "soft" billiard, classically modeled from an optical…

Statistical Mechanics · Physics 2022-05-16 Matheus J. Lazarotto , Iberê L. Caldas , Yves Elskens

The self-assembly of two-dimensional dodecagonal quasicrystal (DDQC) from patchy particles are investigated by Brownian dynamics simulations. The patchy particle has a five-fold rotational symmetry pattern described by the spherical…

Soft Condensed Matter · Physics 2025-02-21 Uyen Tu Lieu , Natsuhiko Yoshinaga

We consider the dynamics of thin two-dimensional viscous droplets on chemically heterogeneous surfaces moving under the combined effects of slip, mass transfer and capillarity. The resulting long-wave evolution equation for the droplet…

Fluid Dynamics · Physics 2021-12-20 Danny Groves , Nikos Savva

We formulate the statistical dynamics of topological defects in the active nematic phase, formed in two dimensions by a collection of self-driven particles on a substrate. An important consequence of the non-equilibrium drive is the…

Soft Condensed Matter · Physics 2018-09-12 Suraj Shankar , Sriram Ramaswamy , M. Cristina Marchetti , Mark J. Bowick

Brownian motion is a universal characteristic of colloidal particles embedded in a host medium, and it is the fingerprint of molecular transport or diffusion, a generic feature of relevance not only in Physics but also in several branches…

Soft Condensed Matter · Physics 2023-06-01 Pavel Castro-Villarreal , César O. Solano-Cabrera , Ramón Castañeda-Priego

Effect of interfacial disturbances on instabilities of buoyant/thermocapillary convective flows in rectangular cavities is studied in a series of numerical experiments. The computations are carried out for several two-liquid two-layer…

Fluid Dynamics · Physics 2022-04-19 Alexander Gelfgat

We describe a two-dimensional model for active particles whose self-propulsion speed is not fixed, but varies in time, and whose motion is subject to both translational and rotational diffusion. In the conventional treatment of active…

Soft Condensed Matter · Physics 2025-10-01 Tayeb Jamali

Shape asymmetry is the most abundant in nature and attracted great interest in recent research. The phenomenon is widely recognized: a free ellipsoidal Brownian particle displays anisotropic diffusion during short time intervals, which…

Soft Condensed Matter · Physics 2025-01-10 Sudipta Mandal , Anirban Ghosh

Reaction-diffusion equation model for a 2-dimensional gas discharge system is introduced in close relationship with the recent experiment by Nasuno. The model shows formation of spots, molecule-like organization of a cluster of spots,…

Pattern Formation and Solitons · Physics 2009-11-11 Takeshi Sugawara , Kunihiko Kaneko

Charged colloidal particles - both on the nano and micron scales - have been instrumental in enhancing our understanding of both atomic and colloidal crystals. These systems can be straightforwardly realized in the lab, and tuned to…

Soft Condensed Matter · Physics 2021-05-05 Rinske M. Alkemade , Marjolein de Jager , Berend van der Meer , Frank Smallenburg , Laura Filion

Two dimensional (2D) colloids exhibit intriguing phase behaviors distinct from those in three dimensions, as well as dynamic heterogeneity reminiscent of glass-forming liquids. Here, using discontinuous molecular dynamics simulations, we…

Soft Condensed Matter · Physics 2026-02-10 Jeongmin Kim , Taejin Kwon , Bong June Sung

As recently reported [Turiv T. et al., Science, 2013, Vol. 342, 1351], fluctuations in the orientation of the liquid crystal (LC) director can transfer momentum from the LC to a colloid, such that the diffusion of the colloid becomes…

Soft Condensed Matter · Physics 2015-06-15 T. Turiv , A. Brodin , V. Nazarenko

In this work we consider bubbles that can form spontaneously when a two-dimensional (2D) crystal is transferred to a substrate with gases or liquids trapped at the crystal-substrate interface. The underlying mechanics may be described by a…

Soft Condensed Matter · Physics 2022-07-06 Zhaohe Dai , Yifan Rao , Nanshu Lu

Topological defects play a prominent role in the physics of two-dimensional materials. When driven out of equilibrium in active nematics, disclinations can acquire spontaneous self-propulsion and drive self-sustained flows upon…

Soft Condensed Matter · Physics 2019-12-06 Suraj Shankar , M. Cristina Marchetti

Understanding geometric frustration of ordered phases in two-dimensional condensed matters on curved surfaces is closely related to a host of scientific problems in condensed matter physics and materials science. Here we show how…

Soft Condensed Matter · Physics 2017-09-05 Zhenwei Yao

Dislocation pileups directly impact the material properties of crystalline solids through the arrangement and collective motion of interacting dislocations. We study the statistical mechanics of these ordered defect structures embedded in…

Statistical Mechanics · Physics 2021-03-03 Grace H. Zhang , David R. Nelson

Two-dimensional (2D) materials display nanoscale dynamic ripples that significantly impact their properties. Defects within the crystal lattice are the elementary building blocks to tailor the material's morphology. While some studies have…

Materials Science · Physics 2025-03-11 Fabian L. Thiemann , Camille Scalliet , Erich A. Müller , Angelos Michaelides

This article is devoted to investigation of cation self-diffusion mechanisms, taking place in UO2, UO2+x, and UO2-x crystals simulated under periodic (PBC) and isolated (IBC) boundary conditions using the method of molecular dynamics in the…

Materials Science · Physics 2015-06-15 A. S. Boyarchenkov , S. I. Potashnikov , K. A. Nekrasov , A. Ya. Kupryazhkin

The diffusion of monovacancies in gold has been studied by computer simulation. Multiple jumps have been found to play a central role in the atomic dynamics at high temperature, and have been shown to be responsible for an upward curvature…

Condensed Matter · Physics 2010-12-17 G. De Lorenzi , F. Ercolessi