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Related papers: Helix formation in linear achiral dendronized poly…

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Microgels are soft colloids that, in virtue of their polymeric nature, can react to external stimuli such as temperature or pH by changing their size. The resulting swelling/deswelling transition can be exploited in fundamental research as…

Soft Condensed Matter · Physics 2019-02-15 Lorenzo Rovigatti , Nicoletta Gnan , Emanuela Zaccarelli

Self-organized monolayers of highly flexible \Frechet dendrons were deposited on graphite surfaces by solution casting. Scanning tunneling microscopy (STM) reveals an unprecedented variety of patterns with up to seven stable hierarchical…

Mesoscale and Nanoscale Physics · Physics 2011-02-18 B. A. Hermann , C. Rohr , M. Balbás Gambra , A. Malecki , M. S. Malarek , E. Frey , T. Franosch

A polymer network can imbibe water, forming an aggregate called hydrogel, and undergo large and inhomogeneous deformation with external mechanical constraint. Due to the large deformation, nonlinearity plays a crucial role, which also…

Biological Physics · Physics 2011-03-04 Hui-Hui Dai , Zilong Song

Helical structures are ubiquitous in nature and engineering, ranging from DNA molecules to plant tendrils, from sea snail shells to nanoribbons. While the helical shapes in natural and engineered systems often exhibit nearly uniform radius…

Mathematical Physics · Physics 2015-06-18 Qiaohang Guo , Zi Chen , Wei Li , Pinqiang Dai , Kun Ren , Junjie Lin , Larry A. Taber , Wenzhe Chen

Building structures with hierarchical order through the self-assembly of smaller blocks is not only a prerogative of nature, but also a strategy to design artificial materials with tailored functions. We explore in simulation the…

Soft Condensed Matter · Physics 2020-02-17 Santi Prestipino , Domenico Gazzillo , Gianmarco Munaò , Dino Costa

The conformational complexity of linear polymers far exceeds that of point-like atoms and molecules. Polymers can bend, twist, even become knotted. Thus they may also display a much richer phase structure than point particles. But it is not…

Biological Physics · Physics 2015-06-16 Andrey Krokhotin , Stam Nicolis , Antti J. Niemi

A significant effort in condensed matter physics is dedicated to the search for exotic arrangements of electric dipoles in crystals. Non-collinear dipolar arrangements mimicking magnetic spin textures, such as polar vortices and skyrmions,…

Mesoscale and Nanoscale Physics · Physics 2025-10-02 Yang Zhang , Mingyu Xu , Jie Li , Suk Hyun Sung , Sang-Wook Cheong , Weiwei Xie , Ismail El Baggari

We use a series of molecular dynamics simulations, and analytical theory, to demonstrate that a system of hard spheres confined to a narrow cylindrical channel exhibits a continuous phase transition from an isotropic fluid at low densities,…

Soft Condensed Matter · Physics 2014-09-18 Mahdi Zaeifi Yamchi , Richard K. Bowles

We study structural properties of a ring polymeric melt confined in a film in comparison to a linear counterpart using molecular dynamics simulations. Local structure orderings of ring and linear polymers in the vicinity of the surface are…

Soft Condensed Matter · Physics 2015-10-21 Eunsang Lee , YounJoon Jung

Molecular process of crystallization from an oriented amorphous state was reproduced by molecular dynamics simulation for a realistic polyethylene model. Initial oriented amorphous state was obtained by uniaxial drawing an isotropic glassy…

Soft Condensed Matter · Physics 2009-11-07 Akira Koyama , Takashi Yamamoto , Koji Fukao , Yoshihisa Miyamoto

An efficient numerical framework is presented for modeling viscoelasticity and permanent set of polymers. It is based on the hereditary integral form of transient network theory, in which polymer chains belong to distinct networks each with…

Computational Engineering, Finance, and Science · Computer Science 2025-06-27 Stephen T. Castonguay , Joshua B. Fernandes , Michael A. Puso , Sylvie Aubry

We study by Monte Carlo simulations and scaling analysis two models of pairs of confined and dense ring polymers in two dimensions. The pair of ring polymers are modelled by squared lattice polygons confined within a square cavity and they…

Soft Condensed Matter · Physics 2022-01-05 EJ Janse van Rensburg , E Orlandini

Studies of the Deep Inelastic Scattering (DIS) have provided fundamental information of the nucleon structure for decades. The electron-ion collider (EIC) will be the first collider capable of DIS study with both polarized lepton and…

High Energy Physics - Phenomenology · Physics 2023-06-02 Paul Anderson , Douglas Higinbotham , Sonny Mantry , Xiaochao Zheng

Dense packing of particles has provided important models to study the structure of matter in various systems such as liquid, glassy and crystalline phase, etc. The simplest sphere packing models are able to represent and capture salient…

Soft Condensed Matter · Physics 2023-03-03 Weihao Wang , Zhenghong Chen , Yang Gao , Yang Jiao , Shaodong Zhang

Ladder polymers, known for their rigid, ladder-like structures, exhibit exceptional thermal stability and mechanical strength, positioning them as candidates for advanced applications. However, accurately determining their structure from…

Soft Condensed Matter · Physics 2025-05-23 Lijie Ding , Chi-Huan Tung , Zhiqiang Cao , Zekun Ye , Xiaodan Gu , Yan Xia , Wei-Ren Chen , Changwoo Do

We present computer simulations of a realistic model of microgels. Unlike the regular network frameworks usually assumed in the simulation literature, we model and simulate a realistic and efficient synthesis route, mimicking cross-linking…

Soft Condensed Matter · Physics 2018-06-12 Angel J. Moreno , Federica Lo Verso

The depletion interaction mediated by non-adsorbing polymers promotes condensation and assembly of repulsive colloidal particles into diverse higher-order structures and materials. One example, with particularly rich emergent behaviors, is…

Soft Condensed Matter · Physics 2016-02-23 Louis Kang , Thomas Gibaud , Zvonimir Dogic , T. C. Lubensky

Based on numerical simulations that we have carried out, we provide evidence that for regular polygons with $\sigma= 6j$ sides (with $j=2,3,\dots$), $N(k)=3 k (k+1)+1$ (with $k=1,2,\dots$) congruent disks of appropriate size can be nicely…

Numerical Analysis · Mathematics 2023-05-03 Paolo Amore , Mauricio Carrizalez , Ulises Zarate

Segments with the amino acid sequence EKAYLRT appear in natural occurring proteins both in $\alpha$-helices and $\beta$-sheets. For this reason, we have use this peptide to study how secondary structure formation in proteins depends on the…

Soft Condensed Matter · Physics 2009-11-10 Yong Peng , Ulrich H. E. Hansmann

We study the depletion-induced self-assembly of indented colloids. Using state-of-the-art Monte Carlo simulation techniques that treat the depletant particles explicitly, we demonstrate that colloids assemble by a lock-and-key mechanism,…

Soft Condensed Matter · Physics 2014-01-13 Douglas J. Ashton , Robert L. Jack , Nigel B. Wilding