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Related papers: Symmetry and Self-Organization in Complex Systems

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As a model of temporally evolving networks, we consider a globally coupled logistic map with variable connection weights. The model exhibits self-organization of network structure, reflected by the collective behavior of units. Structural…

Disordered Systems and Neural Networks · Physics 2009-11-07 Junji Ito , Kunihiko Kaneko

Self-organization and pattern formation in network-organized systems emerges from the collective activation and interaction of many interconnected units. A striking feature of these non-equilibrium structures is that they are often…

Physics and Society · Physics 2016-02-23 Christos Nicolaides , Ruben Juanes , Luis Cueto-Felgueroso

We evolve network topology of an asymmetrically connected threshold network by a simple local rewiring rule: quiet nodes grow links, active nodes lose links. This leads to convergence of the average connectivity of the network towards the…

Disordered Systems and Neural Networks · Physics 2009-10-31 Stefan Bornholdt , Thimo Rohlf

The dynamic instability of the living systems and the "superposition" of different forms of randomness are viewed as a component of the contingently increasing organization of life along evolution. We briefly survey how classical and…

Other Quantitative Biology · Quantitative Biology 2011-04-07 Marcello Buiatti , Giuseppe Longo

Many complex systems--from social and communication networks to biological networks and the Internet--are thought to exhibit scale-free structure. However, prevailing explanations rely on the constant addition of new nodes, an assumption…

Adaptation and Self-Organizing Systems · Physics 2022-11-10 Christopher W. Lynn , Caroline M. Holmes , Stephanie E. Palmer

Many systems of interest exhibit nested emergent layers with their own rules and regularities, and our knowledge about them seems naturally organised around these levels. This paper proposes that this type of hierarchical emergence arises…

Neurons and Cognition · Quantitative Biology 2025-12-02 Fernando E. Rosas

Real networks often form interacting parts of larger and more complex systems. Examples can be found in different domains, ranging from the Internet to structural and functional brain networks. Here, we show that these multiplex systems are…

Physics and Society · Physics 2017-09-11 Kaj-Kolja Kleineberg , Marian Boguna , M. Angeles Serrano , Fragkiskos Papadopoulos

Symmetries are an essential feature of complex networks as they regulate how the graph collective dynamics organizes into clustered states. We here show how to control network symmetries, and how to enforce patterned states of…

Physics and Society · Physics 2020-11-24 L. V. Gambuzza , M. Frasca , F. Sorrentino , L. M. Pecora , S. Boccaletti

We show how scale-free degree distributions can emerge naturally from growing networks by using random walks for selecting vertices for attachment. This result holds for several variants of the walk algorithm and for a wide range of…

Statistical Mechanics · Physics 2007-05-23 T. S. Evans , J. P. Saramaki

Many complex systems can be described in terms of networks of interacting units. Recent studies have shown that a wide class of both natural and artificial nets display a surprisingly widespread feature: the presence of highly heterogeneous…

Disordered Systems and Neural Networks · Physics 2007-05-23 R. Ferrer i Cancho , R. V. Sole

Turing patterns, arising from the interplay between competing species of diffusive particles, has long been an important concept for describing non-equilibrium self-organization in nature, and has been extensively investigated in many…

Pattern Formation and Solitons · Physics 2023-06-26 Jasper van der Kolk , Guillermo García-Pérez , Nikos E. Kouvaris , M. Ángeles Serrano , Marián Boguñá

Many networks describing complex systems are directed: the interactions between elements are not symmetric. Recent work has shown that these networks can display properties such as trophic coherence or non-normality, which in turn affect…

Physics and Society · Physics 2019-08-21 Samuel Johnson

Symmetries in a network regulate its organization into functional clustered states. Given a generic ensemble of nodes and a desirable cluster (or group of clusters), we exploit the direct connection between the elements of the eigenvector…

Adaptation and Self-Organizing Systems · Physics 2023-02-22 P. Khanra , S. Ghosh , D. Aleja , K. Alfaro-Bittner , G. Contreras-Aso , R. Criado , M. Romance , S. Boccaletti , P. Pal , C. Hens

Phylogenetic networks provide a more general description of evolutionary relationships than rooted phylogenetic trees. One way to produce a phylogenetic network is to randomly place $k$ arcs between the edges of a rooted binary phylogenetic…

Populations and Evolution · Quantitative Biology 2025-03-19 Michael Fuchs , Mike Steel , Qiang Zhang

Quite often real-world networks can be thought of as being symmetric, in the abstract sense that vertices can be found to have similar or equivalent structural roles. However, traditional measures of symmetry in graphs are based on their…

Probability · Mathematics 2020-09-04 Jefferson Elbert Simões , Daniel R. Figueiredo , Valmir C. Barbosa

We study an evolutionary algorithm that locally adapts thresholds and wiring in Random Threshold Networks, based on measurements of a dynamical order parameter. A control parameter $p$ determines the probability of threshold adaptations vs.…

Disordered Systems and Neural Networks · Physics 2009-11-13 Thimo Rohlf

A common feature of biological networks is the geometric property of self-similarity. Molecular regulatory networks through to circulatory systems, nervous systems, social systems and ecological trophic networks, show self-similar…

Molecular Networks · Quantitative Biology 2012-03-09 Simon DeDeo , David C. Krakauer

Datasets from several domains, such as life-sciences, semantic web, machine learning, natural language processing, etc. are naturally structured as acyclic graphs. These datasets, particularly those in bio-informatics and computational…

Discrete Mathematics · Computer Science 2014-09-02 Sandeep Gupta

Many natural and social systems develop complex networks, that are usually modelled as random graphs. The eigenvalue spectrum of these graphs provides information about their structural properties. While the semi-circle law is known to…

Statistical Mechanics · Physics 2009-11-07 Illes J. Farkas , Imre Derenyi , Albert-Laszlo Barabasi , Tamas Vicsek

A symmetry is a `change without change'. As simple as it sounds, this concept is the fundamental cornerstone that unifies all branches of theoretical physics. Virtually all physical laws -- ranging from classical mechanics and…

Molecular Networks · Quantitative Biology 2025-03-25 Hernan A. Makse , Paolo Boldi , Francesco Sorrentino , Ian Stewart