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We present an analytical theory for heteropolymer deformation, as exemplified experimentally by stretching of single protein molecules. Using a mean-field replica theory, we determine phase diagrams for stress-induced unfolding of typical…

Statistical Mechanics · Physics 2009-11-07 Phillip L. Geissler , Eugene I. Shakhnovich

We propose the concepts of distributed robustness and r-robustness, well adapted to functional genetics. Then we discuss the robustness of the relaxation time using a chemical reaction description of genetic and signalling networks. First,…

Molecular Networks · Quantitative Biology 2011-11-09 A. N. Gorban , O. Radulescu

We analyze the fragmentation behavior of random clusters on the lattice under a process where bonds between neighboring sites are successively broken. Modeling such structures by configurations of a generalized Potts or random-cluster model…

Statistical Mechanics · Physics 2016-08-08 Eren Metin Elçi , Martin Weigel , Nikolaos G. Fytas

Recently much attention has been paid to the study of the robustness of interdependent and multiplex networks and, in particular, networks of networks. The robustness of interdependent networks can be evaluated by the size of a mutually…

Statistical Mechanics · Physics 2015-06-18 Ginestra Bianconi , Sergey N. Dorogovtsev

We consider the problem of uniformly generating a spanning tree, of a connected undirected graph. This process is useful to compute statistics, namely for phylogenetic trees. We describe a Markov chain for producing these trees. For cycle…

Data Structures and Algorithms · Computer Science 2020-07-08 Luís M. S. Russo , Andreia Sofia Teixeira , Alexandre P Francisco

We explore the relation between the topological relevance of a node in a complex network and the individual dynamics it exhibits. When the system is weakly coupled, the effect of the coupling strength against the dynamical complexity of the…

Chaotic Dynamics · Physics 2019-01-16 A. Tlaie , I. Leyva , R. Sevilla-Escoboza , V. P. Vera-Avila , I. Sendiña-Nadal

We study the mean field approximation of a recent model of cascades on networks relevant to the investigation of systemic risk control in financial networks. In the model, the hypothesis of a trend reinforcement in the stochastic process…

Physics and Society · Physics 2007-11-13 Jan Lorenz , Stefano Battiston

It is shown that the combinatorics of commutation relations is well suited for analyzing the convergence rate of certain Markov chains. Examples studied include random walk on irreducible representations, a local random walk on partitions…

Probability · Mathematics 2008-01-21 Jason Fulman

We consider the distribution of free path lengths, or the distance between consecutive bounces of random particles, in an n-dimensional rectangular box. If each particle travels a distance R, then, as R tends to infinity the free path…

Dynamical Systems · Mathematics 2018-11-14 Samuel Holmin , Pär Kurlberg , Daniel Månsson

The degree distributions of complex networks are usually considered to be power law. However, it is not the case for a large number of them. We thus propose a new model able to build random growing networks with (almost) any wanted degree…

Social and Information Networks · Computer Science 2020-12-08 Thibaud Trolliet , Frédéric Giroire , Stéphane Pérennes

We study the statistical properties of large random networks with specified degree distributions. New techniques are presented for analyzing the structure of social networks. Specifically, we address the question of how many nodes exist at…

Physics and Society · Physics 2007-05-23 Erik Volz

Interdependent networks are characterized by two kinds of interactions: The usual connectivity links within each network and the dependency links coupling nodes of different networks. Due to the latter links such networks are known to…

Physics and Society · Physics 2015-06-18 Marcell Stippinger , János Kertész

The probability distribution of the number $s$ of distinct sites visited up to time $t$ by a random walk on the fully-connected lattice with $N$ sites is first obtained by solving the eigenvalue problem associated with the discrete master…

Statistical Mechanics · Physics 2016-10-21 L. Turban

Fracture of highly stretched materials challenges our view of how things break. We directly visualize rupture of tough double-network (DN) gels at >50\% strain. During fracture, crack tip shapes obey a $x\sim y^{1.6}$ power-law, in contrast…

Soft Condensed Matter · Physics 2018-10-03 Itamar Kolvin , John M. Kolinski , Jian Ping Gong , Jay Fineberg

Suppose each site independently and randomly chooses some sites around it, and it is weakly (strongly) connected with them (if there choose each other). What is the probability that the weak (strong) connected cluster is infinite? We…

Probability · Mathematics 2016-04-04 Mamoru Tanaka

A class of random discrete distributions $P$ is introduced by means of a recursive splitting of unity. Assuming supercritical branching, we show that for partitions induced by sampling from such $P$ a power growth of the number of blocks is…

Probability · Mathematics 2007-05-23 Alexander V. Gnedin , Yuri Yakubovich

We study the properties of discrete-time random walks on networks formed by randomly interconnected cliques, namely, random networks of cliques. Our purpose is to derive the parameters that define the network structure -- specifically, the…

Statistical Mechanics · Physics 2025-04-24 Albano Nannini , Damián Zanette

Break a stick at random at $n-1$ points to obtain $n$ pieces. We give an explicit formula for the probability that every choice of $k$ segments from this broken stick can form a $k$-gon, generalizing similar work. The method we use can be…

Probability · Mathematics 2022-02-03 William Verreault

We have used kinetic Monte Carlo simulations to study the kinetics of unfolding of cross-linked polymer chains under mechanical loading. As the ends of a chain are pulled apart, the force transmitted by each crosslink increases until it…

Biological Physics · Physics 2009-11-10 Kilho Eom , Dmitrii E Makarov , Gregory J. Rodin

This article examines how diseases on random networks spread in time. The disease is described by a probability distribution function for the number of infected and recovered individuals, and the probability distribution is described by a…

Adaptation and Self-Organizing Systems · Physics 2013-05-29 M. Marder
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