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We analyze a class of cell-bulk coupled PDE-ODE models, motivated by quorum and diffusion sensing phenomena in microbial systems, that characterize communication between localized spatially segregated dynamically active signaling…

Pattern Formation and Solitons · Physics 2020-07-20 Sarafa A. Iyaniwura , Michael J. Ward

The success of the shear-transformation-zone (STZ) theory in accounting for broadly peaked, frequency-dependent, glassy viscoelastic response functions is based on the theory's first-principles prediction of a wide range of internal STZ…

Statistical Mechanics · Physics 2011-08-23 J. S. Langer

In this work we investigate the effect of density dependent nonlinear diffusion on pattern formation in the Brusselator system. Through linear stability analysis of the basic solution we determine the Turing and the oscillatory instability…

Mathematical Physics · Physics 2015-06-17 G. Gambino , M. C. Lombardo , M. Sammartino , V. Sciacca

We perform an experimental investigation of the synthesis of complex materials using the Laser-diode heated floating zone method (L-FZ). We will briefly introduce the Infrared-heated floating zone method of bulk crystal growth and then…

Materials Science · Physics 2021-03-10 Alemayehu S. Admasu , Durga Sankar Vavilapalli

We study a fractional reaction-diffusion system with two types of variables: activator and inhibitor. The interactions between components are modeled by cubical nonlinearity. Linearization of the system around the homogeneous state provides…

Pattern Formation and Solitons · Physics 2007-05-23 V. Gafiychuk , B. Datsko , V. Meleshko

Our aim is to calculate the evolution of Algol binaries within the framework of the osculating orbital theory, which considers the perturbing forces acting on the orbit of each star arising from mass exchange via Roche lobe overflow (RLOF).…

Solar and Stellar Astrophysics · Physics 2014-10-15 P. J. Davis , L. Siess , R. Deschamps

Many animals have patterned fur, feathers, or scales, such as the stripes of a zebra. Turing models, or reaction-diffusion systems, are a class of mathematical models of interacting species that have been successfully used to generate…

Biological Physics · Physics 2023-12-04 Michael F. Staddon

Results are presented for the phase separation process of a binary mixture subject to an uniform shear flow quenched from a disordered to a homogeneous ordered phase. The kinetics of the process is described in the context of the…

Condensed Matter · Physics 2012-04-05 F. Corberi , G. Gonnella , A. Lamura

We employed a recently developed semi-empirical Zr potential to determine the diffusivities in the hcp and bcc Zr via molecular dynamics simulation. The point defect concentration was determined directly from MD simulation rather than from…

Materials Science · Physics 2015-05-13 M. I. Mendelev , B. S. Bokstein

We identify a new type of pattern formation in spatially distributed active systems. We simulate one-dimensional two-component systems with predator-prey local interaction and pursuit-evasion taxis between the components. In a sufficiently…

Pattern Formation and Solitons · Physics 2013-05-29 V. N. Biktashev , M. A. Tsyganov

Boundary time crystals are a class of exotic dissipative quantum phases that spontaneously break continuous time-translation symmetry in the thermodynamic limit of open quantum systems. In finite-size systems, the long-time evolution of…

Quantum Physics · Physics 2025-10-06 Zeping Liu , Yaotian Li , Zhaoyu Fei , Xiaoguang Wang

In this paper we study pattern formation arising in a system of a single reaction-diffusion equation coupled with subsystem of ordinary differential equations, describing spatially-distributed growth of clonal populations of precancerous…

Tissues and Organs · Quantitative Biology 2019-05-14 Yuriy Golovaty , Anna Marciniak-Czochra , Mariya Ptashnyk

The shear-transformation-zone (STZ) theory of plastic deformation predicts that sufficiently soft, non-crystalline solids are linearly unstable against forming periodic arrays of microstructural shear bands. A limited nonlinear analysis…

Materials Science · Physics 2009-11-07 J. S. Langer

This paper considers an Ostwald ripening process in which new droplets are injected at a constant rate, with a fixed distribution of radii, and in which droplets are removed when they grow to a specified maximum radius. This process…

Statistical Mechanics · Physics 2025-03-25 Michael Wilkinson

We study the one-dimensional diffusion process which takes place between two reflecting boundaries and which is acted upon by a time-dependent and spatially-constant force. The assumed force possesses both the harmonically oscillating and…

Other Condensed Matter · Physics 2007-05-23 Evzen Subrt , Petr Chvosta

Biologists have long observed periodic-like oxygen consumption oscillations in yeast populations under certain conditions and several unsatisfactory explanations for this phenomenon have been proposed. These "autonomous oscillations" have…

Dynamical Systems · Mathematics 2011-12-02 Erik M. Boczko , Tomas Gedeon , Chris C. Stowers , Todd Young

We present a linearized shear-transformation-zone (STZ) theory of glassy dynamics in which the internal STZ transition rates are characterized by a broad distribution of activation barriers. For slowly aging or fully aged systems, the main…

Materials Science · Physics 2015-03-17 Eran Bouchbinder , J. S. Langer

The phase separation mechanism of a binary liquid mixture off-critically quenched in its miscibility gap is nucleation and growth, its homogeneous phase reaching a metastable equilibrium state. The successive stages of growth of the…

Statistical Mechanics · Physics 2009-11-18 Jean Colombani , Jacques Bert

The LIGO/Virgo detections of compact object mergers have posed a challenge for theories of binary evolution and coalescence. One promising avenue for producing mergers dynamically is through secular eccentricity oscillations driven by an…

Astrophysics of Galaxies · Physics 2023-12-06 Chris Hamilton , Roman R. Rafikov

We present a Molecular Dynamics study of large Lennard-Jones clusters evolving on a crystalline surface. The static and the dynamic properties of the cluster are described. We find that large clusters can diffuse rapidly, as experimentally…

Materials Science · Physics 2009-10-30 Pierre Deltour , Jean-Louis Barrat , Pablo Jensen