English
Related papers

Related papers: Finite-size effects in intracellular microrheology

200 papers

We propose a three dimensional mechanical model of embryonic tissue dynamics. Mechanically coupled adherent cells are represented as particles interconnected with elastic beams which can exert non-central forces and torques. Tissue…

Biological Physics · Physics 2015-06-22 Andras Czirok , Dona Greta Isai

Cellular elastomeric metamaterials are interesting for various applications, e.g. soft robotics, as they may exhibit multiple microstructural pattern transformations, each with its characteristic mechanical behavior. Numerical literature…

Soft Condensed Matter · Physics 2020-05-13 S. Maraghechi , J. P. M. Hoefnagels , R. H. J. Peerlings , O. Rokoš , M. G. D. Geers

We extend the notions of multipole and subsystem symmetries to more general {\it spatially modulated} symmetries. We uncover two instances with exponential and (quasi)-periodic modulations, and provide simple microscopic models in one, two…

Statistical Mechanics · Physics 2021-10-19 Pablo Sala , Julius Lehmann , Tibor Rakovszky , Frank Pollmann

In granular media, the presence of even small amounts of interparticle cohesion manifests as an increase in the bulk strength and stiffness, effects that are typically associated with an increase in the average number of constraints per…

Soft Condensed Matter · Physics 2026-03-10 Abrar Naseer , Karen E. Daniels , Tejas G. Murthy

Intracellular processes often rely on the timely encounter of mobile reaction partners, including intermittently motor-driven organelles. The underlying cytoskeletal network presents a complex landscape that both directs particle movement…

Biological Physics · Physics 2025-12-17 Lizzy Teryoshin , Mario Hidalgo-Soria , Elena F. Koslover

Natural porous systems, such as soil, membranes, and biological tissues comprise disordered structures characterized by dead-end pores connected to a network of percolating channels. The release and dispersion of particles, solutes, and…

Thermal and magnetic effects in a system consisting of thin layers of coupled Ising spins with $S=1/2$ and $S=1$ are considered. The specific heat and the correlation length display maxima at two different temperatures. It is discussed in…

Statistical Mechanics · Physics 2016-08-31 Dragi Karevski , Malte Henkel

Numerical studies of the domain chaos state in a model of rotating Rayleigh-Benard convection suggest that finite size effects may account for the discrepancy between experimentally measured values of the correlation length and the…

Chaotic Dynamics · Physics 2009-10-31 M. C. Cross , M. Louie , D. Meiron

This work proposes an experimental framework to characterize a cohesive law for mode-II interlaminar fracture and demonstrates its implementation. For a size effect study, geometrically scaled end-notched flexure specimens were tested using…

Navigation of microorganisms is controlled by internal processes ultimately sensitive to mechanical or chemical signaling encountered along the path. In many natural environments, such as porous soils or physiological ducts, motile species…

A simple model accounting for the ejection of heavy particles from the vortical structures of a turbulent flow is introduced. This model involves a space and time discretization of the dynamics and depends on only two parameters: the…

Chaotic Dynamics · Physics 2009-11-13 Jeremie Bec , Raphael Chetrite

Tracking experiments in dense biological tissues reveal a diversity of sources f or local energy injection at the cell scale. The effect of cell motility has been largely studied, but much less is known abo ut the effect of the observed…

Soft Condensed Matter · Physics 2017-11-29 Elsen Tjhung , Ludovic Berthier

We describe a novel coarse-grained simulation method for modelling the dynamics of globular macromolecules, such as proteins. The macromolecule is treated as a continuum that is subject to thermal fluctuations. The model includes a…

Computational Physics · Physics 2015-06-11 Robin Oliver , Daniel J. Read , Oliver G. Harlen , Sarah A. Harris

We determine the finite size corrections to the large deviation function of the activity in a kinetically constrained model (the Fredrickson-Andersen model in one dimension), in the regime of dynamical phase coexistence. Numerical results…

Statistical Mechanics · Physics 2012-07-03 Thierry Bodineau , Vivien Lecomte , Cristina Toninelli

In this letter, we focus on the size effect of granular column collapses, which are potentially connected to the dynamics of complex geophysical flows, even if the link between microscopic structures of granular assemblies and their…

Soft Condensed Matter · Physics 2022-01-21 Teng Man , Herbert E. Huppert , Ling Li , Sergio Andres Galindo-Torres

Long-range spatial correlations in the velocity and energy fields of a granular fluid are discussed in the framework of a 1d lattice model. The dynamics of the velocity field occurs through nearest-neighbour inelastic collisions that…

Statistical Mechanics · Physics 2016-10-19 C. A. Plata , A. Manacorda , A. Lasanta , A. Puglisi , A. Prados

Diffusion can be conceptualized, at microscopic scales, as the random hopping of particles between neighboring lattice sites. In the case of diffusion in inhomogeneous media, distinct spatial domains in the system may yield distinct…

Biological Physics · Physics 2017-10-02 Yiwei Li , Osman Kahraman , Christoph A. Haselwandter

Jamming criticality defines a universality class that includes systems as diverse as glasses, colloids, foams, amorphous solids, constraint satisfaction problems, neural networks, etc. A particularly interesting feature of this class is…

In this paper, we study the competition between finite-size effects (i.e. discernibility of particles) and dipole-dipole interactions in few-atom systems coupled to the electromagnetic field in vacuum. We consider two hallmarks of…

Quantum Physics · Physics 2017-10-10 F. Damanet , J. Martin

Motivated by recent experimental studies, we derive and analyze a twodimensional model for the contraction patterns observed in protoplasmic droplets of Physarum polycephalum. The model couples a model of an active poroelastic two-phase…

Pattern Formation and Solitons · Physics 2018-11-21 Markus Radszuweit , Harald Engel , Markus Bär