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Elastic confinements are an important component of many biological systems and dictate the transport properties of suspended particles under flow. In this chapter, we review the Brownian motion of a particle moving in the vicinity of a…

Soft Condensed Matter · Physics 2022-10-28 Abdallah Daddi-Moussa-Ider , Stephan Gekle

The (measure-theoretical) entropy of a diffeomorphism along an expanding invariant foliation is the rate of complexity generated by the diffeomorphism along the leaves of the foliation. We prove that this number varies upper…

Dynamical Systems · Mathematics 2018-12-13 Jiagang Yang

We formulate and characterize a model to describe the dynamics of semiflexible polymers in the presence of activity due to motor proteins attached irreversibly to a substrate, and a transverse pulling force acting on one end of the…

Biological Physics · Physics 2016-02-12 Abhishek Chaudhuri , Debasish Chaudhuri

We study the compression and extension dynamics of a DNA-like polymer interacting with non-DNA binding and DNA-binding proteins, by means of computer simulations. The geometry we consider is inspired by recent experiments probing the…

Soft Condensed Matter · Physics 2017-09-13 M. C. F. Pereira , C. A. Brackley , J. S. Lintuvuori , D. Marenduzzo , E. Orlandini

We investigate the statistical mechanics of a torsionally constrained polymer. The polymer is modeled as a fluctuating rod with bend stiffness A kT and twist stiffness C kT. In such a model, thermal bend fluctuations couple geometrically to…

Soft Condensed Matter · Physics 2009-10-30 J. David Moroz , Philip Nelson

The interaction potential between supported floating bilayers has been determined by grazing incidence specular and off-specular scattering using synchrotron radiation. Our measurements demonstrate that floating bilayers are significantly…

Soft Condensed Matter · Physics 2012-05-21 L. Malaquin , T. Charitat , J. Daillant , S. Lecuyer , G. Fragneto

We analyze the translational and rotational motion of an ellipsoidal Brownian particle from the viewpoint of stochastic thermodynamics. The particle's Brownian motion is driven by external forces and torques and takes place in an…

Statistical Mechanics · Physics 2018-12-19 Raffaele Marino , Ralf Eichhorn , Erik Aurell

We investigate excluded-volume effects in a bidisperse colloidal suspension near a flexible interface. Inspired by a recent experiment by Dinsmore et al. (Phys. Rev, Lett. 80, 409 (1998)), we study the adsorption of a mesoscopic bead on the…

Soft Condensed Matter · Physics 2009-11-10 Thomas Bickel

The conformational properties of a semi-flexible polymer chain, anchored at one end in a uniform force field, are studied in a simple two-dimensional model. Recursion relations are derived for the partition function and then iterated…

Soft Condensed Matter · Physics 2009-11-07 A. Lamura , T. W. Burkhardt , G. Gompper

Cells moving on a two dimensional substrate generate motion by polymerizing actin filament networks inside a flat membrane protrusion. New filaments are generated by branching off existing ones, giving rise to branched network structures.…

Biological Physics · Physics 2015-06-29 Mohammadhosein Razbin , Martin Falcke , Panayotis Benetatos , Annette Zippelius

We investigate the folding and forced-unbinding transitions of adsorbed semiflexible polymer chains using theory and simulations. These processes describe biologically relevant phenomena that include adhesive interactions between proteins…

Soft Condensed Matter · Physics 2007-05-23 V. Barsegov , D. Thirumalai

Following earlier work, reference is made to the classical entropic force which results from spatially variable disorder, an exclusively repulsive force. In terms of macroscopic variables it is applied to magnetohydrodynamics, causing minor…

Space Physics · Physics 2023-05-16 W. Baumjohann , R. A. Treumann

In this paper, we study the idea about gravity as entropic force proposed by Verlinde. By applying the identification between partition functions of gravity theory and the dual field theory, we find the gravitational force can be calculated…

High Energy Physics - Theory · Physics 2015-05-18 Yue Zhao

This paper reports the force spectroscopy analysis of a polymer that translocates from one side of a membrane to the other side through an extended pore, pulled by a cantilever that moves with constant velocity against the damping and the…

Soft Condensed Matter · Physics 2018-12-12 Alessandro Fiasconaro , Fernando Falo

We consider an inextensible, semiflexible polymer or worm-like chain which is confined in the transverse direction by a parabolic potential and subject to a longitudinal force at the ends, so that the polymer is stretched out and…

Soft Condensed Matter · Physics 2015-05-28 Theodore W. Burkhardt

The results obtained from molecular dynamics simulations of the friction at an interface between polymer melts and weakly attractive crystalline surfaces are reported. We consider a coarse-grained bead-spring model of linear chains with…

Soft Condensed Matter · Physics 2012-06-12 Nikolai V. Priezjev

We introduce an anisotropic mean-field approach for the dynamics of semiflexible polymers under intermediate tension, the force range where a chain is partially extended but not in the asymptotic regime of a nearly straight contour. The…

Soft Condensed Matter · Physics 2011-07-14 Michael Hinczewski , Roland R. Netz

Understanding force generation in non-equilibrium systems is a significant challenge in statistical physics. We uncover a surprising fluctuation-induced force between two plates immersed in homogeneous isotropic turbulence using Direct…

Fluid Dynamics · Physics 2018-11-20 Vamsi Spandan , Daniel Putt , Rodolfo Ostilla-Mónico , Alpha Albert Lee

Taking into account the nonequivalence of fixed-force and fixed-length ensembles in the weak-force regime, equations of state are derived that describe the equilibrium extension or compression of an ideal Gaussian polymer chain in response…

Soft Condensed Matter · Physics 2007-05-23 Richard M. Neumann

Lubrication forces depend to a high degree on elasticity, texture, charge, chemistry, and temperature of the interacting surfaces. Therefore, by appropriately designing surface properties, we may tailor lubrication forces to reduce…

Soft Condensed Matter · Physics 2020-08-19 Aidan Rinehart , Uǧis L{ā}cis , Thomas Salez , Shervin Bagheri