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Transport of molecular motors along protein filaments in a half-closed geometry is a common feature of biologically relevant processes in cellular protrusions. Using a lattice gas model we study how the interplay between active and…

Biological Physics · Physics 2017-03-30 Isabella R. Graf , Erwin Frey

We examine the effects of electron-electron interactions on transport between edge states in a multilayer integer quantum Hall system. The edge states of such a system, coupled by interlayer tunneling, form a two-dimensional, chiral metal…

Mesoscale and Nanoscale Physics · Physics 2007-05-23 J. W. Tomlinson , J. -S. Caux , J. T. Chalker

Electronic ratchets transduce local spatial asymmetries into directed currents in the absence of a global drain bias, by rectifying temporal signals that reside far from thermal equilibrium. We show that the absence of a drain bias can…

Mesoscale and Nanoscale Physics · Physics 2015-06-15 Mehdi Kabir , Dincer Unluer , Lijun Li , Avik W. Ghosh , Mircea R. Stan

The predictions of a class of phenomenological trap models of supercooled liquids are tested via computer simulation of a model glass-forming liquid. It is found that a model with a Gaussian distribution of trap energies provides a good…

Soft Condensed Matter · Physics 2007-05-23 R. Aldrin Denny , David R. Reichman , Jean-Philippe Bouchaud

A Cellular Automata (CA) rule is presented that can generate "loop patterns" in a 2D grid under fixed boundary conditions. A loop is a cyclically closed path represented by one-cells enclosed by zero-cells. A loop pattern can contain…

Cellular Automata and Lattice Gases · Physics 2025-05-30 Rolf Hoffmann , Mariusz Białecki

We analyse the potential effects of lateral connectivity (amacrine cells and gap junctions) on motion anticipation in the retina. Our main result is that lateral connectivity can-under conditions analysed in the paper-trigger a wave of…

Quantitative Methods · Quantitative Biology 2020-09-07 Selma Souihel , Bruno Cessac

Motion of an atomic ensemble trapped into a deep optical lattice is considered. We propose a novel approach to construct an atomic ratchet by superimposing two additional lattices whose amplitudes are small and subjected to broadband…

Chaotic Dynamics · Physics 2013-11-13 D. V. Makarov , L. E. Kon'kov

The spontaneous nucleation and dynamics of topological kink defects have been studied in trapped arrays of 41-43 Yb ions. The number of kinks formed as a function of quench rate across the linear-zigzag transition is measured in the…

Atomic Physics · Physics 2015-06-15 S. Ejtemaee , P. C. Haljan

The efficiency of solution-processed colloidal quantum dot (QD) based solar cells is limited by poor charge transport in the active layer of the device, which originates from multiple trapping sites provided by QD surface defects. We apply…

Mesoscale and Nanoscale Physics · Physics 2013-10-08 Artem A. Bakulin , Stefanie Neutzner , Huib J. Bakker , Laurent Ottaviani , Damien Barakel , Zhuoying Chen

We define a cellular automaton where a resting cell excites if number of its excited neighbours belong to some specified interval and boundaries of the interval change depending on ratio of excited and refractory neighbours in the cell's…

Cellular Automata and Lattice Gases · Physics 2013-02-27 Andrew Adamatzky

We establish new connections between percolation, bootstrap percolation, probabilistic cellular automata and deterministic ones. Surprisingly, by juggling with these in various directions, we effortlessly obtain a number of new results in…

Probability · Mathematics 2024-11-26 Ivailo Hartarsky

We present atomistic simulations of conductive bridging random access memory (CBRAM) cells from first-principles combining density-functional theory and the Non-equilibrium Green's Function formalism. Realistic device structures with an…

This tutorial is about cellular automata that exhibit 'cold dynamics'. By this we mean zero entropy, stabilization of all orbits, trivial asymptotic dynamics, etc. These are purely transient irreversible dynamics, but they capture many…

Cellular Automata and Lattice Gases · Physics 2022-06-17 Guillaume Theyssier

We analyze the dynamics of Brownian ratchets in a confined environment. The motion of the particles is described by a Fick-Jakobs kinetic equation in which the presence of boundaries is modeled by means of an entropic potential. The cases…

Soft Condensed Matter · Physics 2013-05-23 Paolo Malgaretti , Ignacio Pagonabarraga , J. Miguel Rubi

We study the appearance of directed current in tunnel junctions, quantum ratchet effect, in the presence of an external ac field f(t). The current is established in a one-dimensional discrete inhomogeneous "tight-binding model". By making…

Condensed Matter · Physics 2009-11-10 M. V. Fistul , A. E. Miroshnichenko , S. Flach

Orientational fluctuations of colloidal particles with magnetic moments may be rectified with the help of external magnetic fields with suitably chosen time dependence. As a result a noise-driven rotation of particles occurs giving rise to…

Statistical Mechanics · Physics 2013-05-29 Volker Becker Andreas Engel

We extend the theory of Cellular Automata to arbitrary, time-varying graphs. In other words we formalize, and prove theorems about, the intuitive idea of a labelled graph which evolves in time - but under the natural constraint that…

Discrete Mathematics · Computer Science 2012-05-09 Pablo Arrighi , Gilles Dowek

While the linear radiofrequency trap finds various applications in high-precision spectroscopy and quantum information, its higher-order cousin, the linear multipole trap, is almost exclusively employed in physical chemistry. Recently,…

We simulate the nonlinear dynamic responses in Kirchhoff rod by including the important effects due to inertia and kinematic coupling of tension and torsion. We begin by reviewing a dynamic rod model of a strand (length of cable or DNA) in…

Computational Physics · Physics 2007-05-23 Sachin Goyal , Noel C. Perkins

We use a simple model to extend network models for activated dynamics to a continuous landscape with a well-defined notion of distance and a direct connection to many-body systems. The model consists of a tracer in a high-dimensional funnel…

Disordered Systems and Neural Networks · Physics 2020-05-13 Matthew R. Carbone , Valerio Astuti , Marco Baity-Jesi