Related papers: RNAlike polymer model: exact calculation on the Be…
We introduce an extension of the lattice model of melting of semiflexible polymers originally proposed by Flory. Along with a bending penalty, present in the original model and involving three sites of the lattice, we introduce an…
We characterize the low temperature phase of a simple model for RNA secondary structures by determining the typical energy scale E(l) of excitations involving l bases. At zero temperature, we find a scaling law E(l) \sim l^\theta with…
We continue our lattice simulations of QCD with 2 flavours of colour-sextet quarks as a model for conformal or walking technicolor. A 2-loop perturbative calculation of the $\beta$-function which describes the evolution of this theory's…
We decorate the square lattice with two species of polygons under the constraint that every lattice edge is covered by only one polygon and every vertex is visited by both types of polygons. We end up with a 24 vertex model which is known…
The magnetic properties of the mixed spin-$\frac{1}{2}$ and spin-$\frac{7}{2}$ Ising model with a crystal-field in a longitudinal magnetic field are investigated on the Bethe lattice using exact recursion relations. The ground-state phase…
We study a model of bacterial dynamics where two interacting random walkers perform run-and-tumble motion on a one-dimensional lattice under mutual exclusion and find an exact expression for the probability distribution in the steady state.…
In view of recent intense experimental and theoretical interests in the biophysics of liquid-liquid phase separation (LLPS) of intrinsically disordered proteins (IDPs), heteropolymer models with chain molecules configured as self-avoiding…
In this article, we focus on two toy models : the Curie-Weiss model and the system of $N$ particles in linear interactions in a double well confining potential. Both models, which have been extensively studied, describe a large system of…
Exact analyses are given for two three-dimensional lattice systems: A system of close-packed dimers placed in layers of honeycomb lattices and a layered triangular-lattice interacting domain wall model, both with nontrivial interlayer…
The kinetic folding of RNA sequences into secondary structures is modeled as a complex adaptive system, the components of which are possible RNA structural rearrangements (SRs) and their associated bases and base pairs. RNA bases and base…
We use a lattice Boltzmann method to study pattern formation in chemically reactive binary fluids in the regime where hydrodynamic effects are important. The coupled equations solved by the method are a Cahn-Hilliard equation, modified by…
We study equilibrium properties of catalytically-activated $A + A \to \oslash$ reactions taking place on a lattice of adsorption sites. The particles undergo continuous exchanges with a reservoir maintained at a constant chemical potential…
We evaluate the particle current flowing in steady state through a Bose-Einstein condensate subject to a constant force in a quasi-onedimensional lattice and to attractive interactions from fermionic atoms that are localized in various…
The entanglement properties of the phase transition in a two dimensional harmonic lattice, similar to the one observed in recent ion trap experiments, are discussed both, for finite number of particles and thermodynamical limit. We show…
The dynamics of compaction of hard cross-shaped pentamers on the 2D square lattice is investigated. The addition of new particles is controlled by diffusive relaxation. It is shown that the filling process terminates at a glassy phase with…
We solve exactly a model of monodispersed rigid rods of length $k$ with repulsive interactions on the random locally tree like layered lattice. For $k\geq 4$ we show that with increasing density, the system undergoes two phase transitions:…
An RNA molecule is structured on several layers. The primary and most obvious structure is its sequence of bases, i.e. a word over the alphabet {A,C,G,U}. The higher structure is a set of one-to-one base-pairings resulting in a…
Spontaneous onset of a low temperature topologically ordered phase in a 2-dimensional (2D) lattice model of uniaxial liquid crystal (LC) was debated extensively pointing to a suspected underlying mechanism affecting the RG flow near the…
We develop a new analytic approach for the study of lattice heteropolymers, and apply it to copolymers with correlated Markovian sequences. According to our analysis, heteropolymers present three different dense phases depending upon the…
We study the interacting self-avoiding trail (ISAT) model on a Bethe lattice of general coordination $q$ and on a Husimi lattice built with squares and coordination $q=4$. The exact grand-canonical solutions of the model are obtained,…