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We investigate self-avoiding walk models of linear block copolymers adsorbed at a surface and desorbed by the action of a force. We rigorously establish the dependence of the free energy on the adsorption and force parameters, and the form…

Statistical Mechanics · Physics 2020-12-30 EJ Janse van Rensburg , CE Soteros , SG Whittington

Designing microscopic and nanoscopic self-propelled particles and characterising their motion has become a major scientific challenge over the past decades. To this purpose, phoretic effects, namely propulsion mechanisms relying on local…

Soft Condensed Matter · Physics 2021-04-09 Pierre Illien , Ramin Golestanian , Ayusman Sen

We present the first numerical simulation of actin-driven propulsion by elastic filaments. Specifically, we use a Brownian dynamics formulation of the dendritic nucleation model of actin-driven propulsion. We show that the model leads to a…

Cell Behavior · Quantitative Biology 2009-11-13 Kun-Chun Lee , Andrea J. Liu

We study the translocation of a semiflexible polymer through a conical channel with attractive surface interactions and a driving force which varies spatially inside the channel. Using the results of the translocation dynamics of a flexible…

Soft Condensed Matter · Physics 2022-11-15 Andri Sharma , Rajeev Kapri , Abhishek Chaudhuri

The coupled dynamics of entangled polymers which span a broad time and length scales govern the unique viscoelastic properties of polymers. To follow chain mobility by numerical simulations from the intermediate Rouse and reptation regimes…

Soft Condensed Matter · Physics 2016-11-03 Gary S. Grest

The motion of a one-dimensional kink and its energy losses are considered as a model of interaction of nontrivial topological field configurations with external fields.

High Energy Physics - Theory · Physics 2007-05-23 Ya. M. Shnir

The transport of molecules for chemical reactions is critically important in various cellular biological processes. Despite thermal diffusion being prevalent in many biochemical processes, it is unreliable for any sort of directed transport…

Soft Condensed Matter · Physics 2026-04-09 Shashank Ravichandir , Bhavesh Valecha , Pietro Luigi Muzzeddu , Jens-Uwe Sommer , Abhinav Sharma

By analyzing the real space nonequilibrium dynamics of polymers, we elucidate the physics of driven translocation and propose its dynamical scaling scenario analogous to that in the surface growth phenomena. We provide a detailed account of…

Soft Condensed Matter · Physics 2011-11-28 Takuya Saito , Takahiro Sakaue

We analyze the free energy for translocation of a polymer from the outside of a spherical vesicle to the inside. The process is assumed to be driven by the adsorption of the polymer on the inner surface of the vesicle. We argue that in the…

Soft Condensed Matter · Physics 2009-10-31 K. Kiran Kumar , K. L. Sebastian

We consider forces acting on objects immersed in, or attached to, long fluctuating polymers. The confinement of the polymer by the obstacles results in polymer-mediated forces that can be repulsive (due to loss of entropy) or attractive (if…

Statistical Mechanics · Physics 2017-08-28 Yacov Kantor , Mehran Kardar

The pervasive phenomenon of friction has been studied at the nanoscale by controlled manipulation of single atoms and molecules, which permitted a precise determination of the static friction force necessary to initiate motion. However,…

Mesoscale and Nanoscale Physics · Physics 2023-10-04 Norio Okabayashi , Thomas Frederiksen , Alexander Liebig , Franz J. Giessibl

Active matter agents consume internal energy or extract energy from the environment for locomotion and force generation. Already rather generic models, such as ensembles of active Brownian particles, exhibit phenomena, which are absent at…

Soft Condensed Matter · Physics 2020-07-27 Roland G. Winkler , Gerhard Gompper

We present a numerical study of forced polymer translocation by using two separate pore models. Both of them have been extensively used in previous forced translocation studies. We show that variations in the pore model affect the forced…

Biological Physics · Physics 2015-05-19 V. V. Lehtola , K. Kaski , R. P. Linna

We study the conformation and dynamics of a single polymer chain that is pulled by a constant force applied at its one end with the other end free. Such a situation is relevant to the growing technology of manipulating individual…

Soft Condensed Matter · Physics 2015-06-04 Takahiro Sakaue , Takuya Saito , Hirofumi Wada

We present results from molecular dynamics simulations of a spherically confined neutral polymer in the presence of crowding agents, studying polymer shapes and conformations as a function of the confining potential, solvent quality and the…

Soft Condensed Matter · Physics 2020-01-29 Kamal Tripathi , Gautam I. Menon , Satyavani Vemparala

The dynamic behavior of a partially wetting polymer droplet driven over a nanostructured interface is studied using molecular dynamics simulations. We consider the bead-spring model to represent a polymeric liquid that partially wets a…

Soft Condensed Matter · Physics 2020-06-17 Anish Thomas , Nikolai V. Priezjev

During polymer translocation driven by e.g. voltage drop across a nanopore, the segments in the cis-side is incessantly pulled into the pore, which are then pushed out of it into the trans-side. This pulling and pushing polymer segments are…

Soft Condensed Matter · Physics 2015-06-16 Takuya Saito , Takahiro Sakaue

Frontal polymerization is a promising energy-saving method for rapid fabrication of polymer components with good mechanical properties. In these systems, a small energy input is sufficient to convert monomers, from a liquid or soft solid…

Soft Condensed Matter · Physics 2023-10-04 Xuanhe Li , Tal Cohen

We describe some recent results concerning the statistical properties of a self-interacting polymer stretched by an external force. We concentrate mainly on the cases of purely attractive or purely repulsive self-interactions, but our…

Probability · Mathematics 2011-08-25 Dmitry Ioffe , Yvan Velenik

Using Molecular Dynamics simulations of a coarse-grained polymer liquid we investigate the transport of droplets on asymmetrically structured (saw-tooth shaped), vibrating substrates. Due to a continuous supply of power by substrate…

Soft Condensed Matter · Physics 2013-12-18 Nikita Tretyakov , Marcus Müller