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Noise is usually regarded as adversarial to extract the effective dynamics from time series, such that the conventional data-driven approaches usually aim at learning the dynamics by mitigating the noisy effect. However, noise can have a…

Adaptation and Self-Organizing Systems · Physics 2023-09-12 Zequn Lin , Zhaofan Lu , Zengru Di , Ying Tang

A simple model of an irreversible process is introduced. The equation of iterations in the model includes a noise generation term. We study the properties of the system when the noise generation term is a stochastic process (e.g. a random…

Chaotic Dynamics · Physics 2007-05-23 M. A. Sozanski , J. J. Zebrowski

Many neuronal systems and models display a certain class of mixed mode oscillations (MMOs) consisting of periods of small amplitude oscillations interspersed with spikes. Various models with different underlying mechanisms have been…

Adaptation and Self-Organizing Systems · Physics 2015-03-13 Peter Borowski , Rachel Kuske , Yue-Xian Li , Juan Luis Cabrera

We explore the joint effect of the intrinsic noise and time delay on the spatial pattern formation within a multi-scale mobile lattice model of the epithelium. The protein fluctuations are driven by transcription/translation processes in…

Adaptation and Self-Organizing Systems · Physics 2015-06-12 Dmitry Bratsun , Andrey Zakharov

It is well known that the kinetics of an intracellular biochemical network is stochastic. This is due to intrinsic noise arising from the random timing of biochemical reactions in the network as well as due to extrinsic noise stemming from…

Subcellular Processes · Quantitative Biology 2019-06-05 Emma M. Keizer , Bjorn Bastian , Robert W. Smith , Ramon Grima , Christian Fleck

Stochastic systems characterised by a random driving in a form of the general stable noise are considered. The particle experiences long rests due to the traps the density of which is position-dependent and obeys a power-law form attributed…

Statistical Mechanics · Physics 2016-07-06 Tomasz Srokowski

Qubit noise spectroscopy is an important tool for the experimental investigation of open quantum systems. However, conventional techniques for noise spectroscopy are time-consuming, because they require measurements of the noise spectral…

Quantum Physics · Physics 2025-06-24 Kaixin Huang , Demitry Farfurnik , Alireza Seif , Mohammad Hafezi , Yi-Kai Liu

We report a noise induced delay of bifurcation in a simple pulse-coupled neural circuit. We study the behavior of two neural oscillators, each individually governed by saddle-node dynamics, with reciprocal excitatory synaptic connections.…

Biological Physics · Physics 2007-05-23 Boris Gutkin , Tim Hely , Juergen Jost

Identifying and controlling decoherence in single electron sources (SES) is important for their applications in quantum information processing. The recent experiments with ultrashort electron pulses [J. D. Fletcher et al., Nat. Commun. 10,…

Mesoscale and Nanoscale Physics · Physics 2024-04-18 Sungguen Ryu , Rosa López , Llorenç Serra , David Sanchez , Michael Moskalets

We consider a class of multi-qubit dephasing models that combine classical noise sources and linear coupling to a bosonic environment, and are controlled by arbitrary sequences of dynamical decoupling pulses. Building on a general transfer…

Quantum Physics · Physics 2016-08-03 Gerardo A. Paz-Silva , Seung-Woo Lee , Todd J. Green , Lorenza Viola

Some systems cannot be predicted by classical theories and it is required the development of combined deterministic and stochastic theories that make used of noise for dynamical prediction. Noise is not always an interfering signal which…

Adaptation and Self-Organizing Systems · Physics 2019-05-14 Alexandra Pinto Castellanos

For cellular biochemical reaction systems where the numbers of molecules is small, significant noise is associated with chemical reaction events. This molecular noise can give rise to behavior that is very different from the predictions of…

Molecular Networks · Quantitative Biology 2009-11-13 Matthew Scott , Terence Hwa , Brian Ingalls

It has been proposed that neural noise in the cortex arises from chaotic dynamics in the balanced state: in this model of cortical dynamics, the excitatory and inhibitory inputs to each neuron approximately cancel, and activity is driven by…

Disordered Systems and Neural Networks · Physics 2017-04-28 Nimrod Shaham , Yoram Burak

The correlated variability in the responses of a neural population to the repeated presentation of a sensory stimulus is a universally observed phenomenon. Such correlations have been studied in much detail, both with respect to their…

Neurons and Cognition · Quantitative Biology 2018-07-04 Volker Pernice , Rava Azeredo da Silveira

Noise can induce time order in the dynamics of nonlinear dynamical systems. For example, coherence resonance occurs in various neuron models driven by a noise. In studies of coherence resonance, ensemble-averaged measures of the coherence…

Adaptation and Self-Organizing Systems · Physics 2023-10-05 Go Uchida

Compartment models with delay terms are widely used across a range of disciplines. The motivation to include delay terms varies across different contexts. In epidemiological and pharmacokinetic models, the delays are often used to represent…

Dynamical Systems · Mathematics 2024-06-26 Christopher N. Angstmann , Anna V. McGann , Zhuang Xu

We study a generalization of the Heston model, which consists of two coupled stochastic differential equations, one for the stock price and the other one for the volatility. We consider a cubic nonlinearity in the first equation and a…

Statistical Mechanics · Physics 2009-11-11 G. Bonanno , D. Valenti , B. Spagnolo

Quantitative single cell measurements have shown that cell cycle duration (the time between cell divisions) for diverse cell types is a noisy variable. The underlying distribution is mean scalable with a universal shape for many cell types…

Cell Behavior · Quantitative Biology 2016-03-07 Nash Rochman , Fangwei Si , Sean X. Sun

We introduce a modified SIR model with memory for the dynamics of epidemic spreading in a constant population of individuals. Each individual is in one of the states susceptible (${\bf S}$), infected (${\bf I}$) or recovered (${\bf R}$). In…

Populations and Evolution · Quantitative Biology 2022-03-03 Michael Bestehorn , Thomas M. Michelitsch , Bernard A. Collet , Alejandro P. Riascos , Andrzej F. Nowakowski

Out-of-equilibrium disordered systems may form memories of external driving in a remarkable fashion. The system "remembers" multiple values from a series of training inputs yet "forgets" nearly all of them at long times despite the inputs…

Soft Condensed Matter · Physics 2015-05-27 Nathan C. Keim , Sidney R. Nagel
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