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In this paper we develop a probabilistic micro-scale compartmental model and use it to study macro-scale properties of axonal transport, the process by which intracellular cargo is moved in the axons of neurons. By directly modeling the…

Biological Physics · Physics 2011-05-24 Lea Popovic , Scott A. McKinley , Michael C. Reed

Self-organization and nonequilibrium phase transitions are well known to occur in two- and three- dimensional dissipative systems. Here, instead, we provide numerical evidence that these phenomena also occur in a one-dimensional Hamiltonian…

Statistical Mechanics · Physics 2017-01-31 Jiao Wang , Giulio Casati

We consider the effects of memory on the stationary behavior of a two-dimensional Langevin dynamics in a confining potential. The system is treated in an overdamped approximation and the degrees of freedom are under the influence of…

Statistical Mechanics · Physics 2020-01-29 Eduardo dos S. Nascimento , Welles A. M. Morgado

Driven non-equilibrium lattice models have wide-ranging applications in contexts such as mass transport, traffic flow, and transport in biological systems. In this work, we investigate the steady-state properties of a one-dimensional…

Statistical Mechanics · Physics 2026-01-16 Swastik Majumder , Mustansir Barma

We study analytically and by computer simulations a complex system of adaptive agents with finite memory. Borrowing the framework of the Minority Game and using the replica formalism we show the existence of an equilibrium phase transition…

Statistical Mechanics · Physics 2009-11-07 M. Marsili , R. Mulet , F. Ricci-Tersenghi , R. Zecchina

Statistical properties of Brownian motion that arise by analyzing, separately, trajectories over which the system energy increases (upside) or decreases (downside) with respect to a threshold energy level, are derived. This selective…

Statistical Mechanics · Physics 2019-08-02 Galen T. Craven , Abraham Nitzan

Recent experiments in hybrid-quantum systems facilitate the potential realization of one of the most fundamental interacting Hamiltonian-Reservoir system, namely, the single-site Bose-Hubbard model coupled to two reservoirs at different…

Quantum Physics · Physics 2017-01-02 Archak Purkayastha , Abhishek Dhar , Manas Kulkarni

The standard approach to non-equilibrium thermodynamics describes transport in terms of generalised forces and coupled currents, a typical example being the Fourier law that relates temperature gradient to the heat flux. Here we demonstrate…

Statistical Mechanics · Physics 2015-05-20 Simone Borlenghi , Stefano Iubini , Stefano Lepri , Lars Bergqvist , Anna Delin , Jonas Frannson

Intracellular transport processes driven by molecular motors can be described by stochastic lattice models of self-driven particles. Here we focus on bidirectional transport models excluding the exchange of particles on the same track. We…

Biological Physics · Physics 2015-05-27 M. Ebbinghaus , C. Appert-Rolland , L. Santen

In this work, we investigate the dynamics of interacting particle systems subjected to repulsive forces, such as lattices of magnetized particles. To this end, we first develop a general model capable of capturing the complete dynamical…

Applied Physics · Physics 2021-03-22 Weijian Jiao , Stefano Gonella

Enzymatic molecules that actively support many cellular processes, including transport, cell division and cell motility, are known as motor proteins or molecular motors. Experimental studies indicate that they interact with each other and…

Biological Physics · Physics 2015-05-20 Daniel Celis-Garza , Hamid Teimouri , Anatoly B. Kolomeisky

On applying a small bias force, non-equilibrium systems may respond in paradoxical ways such as with giant negative mobility (GNM) -- a large net drift opposite to the applied bias, or giant positive mobility (GPM) -- an anomalously large…

Soft Condensed Matter · Physics 2024-10-21 Rahil N. Valani , Bruno S. Dandogbessi

In a viscous fluid, the past motion of an accelerating particle is retained as an imprint on the vorticity field, which decays slowly as $t^{-3/2}$. At low Reynolds number, the Basset-Boussinesq-Oseen (BBO) equation correctly describes…

Fluid Dynamics · Physics 2019-10-16 Sean L Seyler , Steve Pressé

We study how conservation laws shape the spreading of quantum coherence in many-body dynamics. Focusing on $U(1)$-symmetric random circuits, charge-and-dipole conserving circuits, as well as ergodic Hamiltonian dynamics, we probe coherences…

Quantum Physics · Physics 2026-04-28 Sreemayee Aditya , Emanuele Tirrito , Piotr Sierant , Xhek Turkeshi

The role of non-equilibrium effects in the conductance through quantum dots is investigated. Associated with single-electron tunneling are shake-up processes and the formation of excitonic-like resonances. They change qualitatively the low…

Mesoscale and Nanoscale Physics · Physics 2009-10-31 E. Bascones , C. P. Herrero , F. Guinea , G. Schon

The distribution of the initial short-time displacements of particles is considered for a class of classical systems under rather general conditions on the dynamics and with Gaussian initial velocity distributions, while the positions could…

Statistical Mechanics · Physics 2007-05-23 R. van Zon , E. G. D. Cohen

The exact quantum dynamics of lattice models can be computationally intensive, especially when aiming for large system sizes and extended simulation times necessary to converge transport coefficients. By leveraging finite memory times to…

Chemical Physics · Physics 2024-11-14 Srijan Bhattacharyya , Thomas Sayer , Andrés Montoya-Castillo

Quantum transport of strongly correlated fermions is of central interest in condensed matter physics. Here, we present first-principle nonequilibrium Green functions results using $T$-matrix selfenergies for finite Hubbard clusters of…

Quantum Gases · Physics 2016-01-15 N. Schlünzen , S. Hermanns , M. Bonitz , C. Verdozzi

A new variational method for studying the equilibrium states of an interacting particles system has been proposed. The statistical description of the system is realized by means of a density matrix. This method is used for description of…

General Physics · Physics 2014-12-19 Boris Bondarev

The Brownian motion in water-ethanol mixtures exhibits abnormally large displacements. Using falling-ball viscometry applied to colloidal particles, we experimentally verified that no anomaly exists in the viscosity coefficient of the…

Soft Condensed Matter · Physics 2025-03-14 Ken Judai , Satoshi Shibuta , Kazuki Furukawa