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Humans are not only adept in recognizing what class an input instance belongs to (i.e., classification task), but perhaps more remarkably, they can imagine (i.e., generate) plausible instances of a desired class with ease, when prompted.…

Neurons and Cognition · Quantitative Biology 2021-07-02 Ardavan Salehi Nobandegani , Thomas R. Shultz

In many networks of scientific interest we know that the link between any pair of vertices conforms to a specific probability, such as the link probability in the Barab\'asi-Albert scale-free networks. Here we demonstrate how the…

Physics and Society · Physics 2019-06-06 Shuangyan Wang , Gang Mei

Complex network theory has been used to study complex systems. However, many real-life systems involve multiple kinds of objects . They can't be described by simple graphs. In order to provide complete information of these systems, we…

Physics and Society · Physics 2015-11-10 Jin-Li Guo , Xin-Yun Zhu

One of the most demanding calculations is to generate random samples from a specified probability distribution (usually with an unknown normalizing prefactor) in a high-dimensional configuration space. One often has to resort to using a…

Computational Physics · Physics 2015-06-18 Youhan Fang , Jesus-Maria Sanz-Serna , Robert D. Skeel

In this paper, we review a method for computing and parameterizing the set of homotopy classes of chain maps between two chain complexes. This is then applied to finding topologically meaningful maps between simplicial complexes, which in…

Computational Geometry · Computer Science 2011-08-18 Andrew Tausz , Gunnar Carlsson

Networks are a powerful tool to model complex systems, and the definition of many Graph Neural Networks (GNN), Deep Learning algorithms that can handle networks, has opened a new way to approach many real-world problems that would be hardly…

Machine Learning · Computer Science 2021-09-28 Marco Grassia , Manlio De Domenico , Giuseppe Mangioni

Graph-based signal processing techniques have become essential for handling data in non-Euclidean spaces. However, there is a growing awareness that these graph models might need to be expanded into `higher-order' domains to effectively…

Machine Learning · Computer Science 2024-04-15 Mustafa Hajij , Ghada Zamzmi , Theodore Papamarkou , Aldo Guzmán-Sáenz , Tolga Birdal , Michael T. Schaub

The past decade has seen tremendous growth in the field of Complex Social Networks. Several network generation models have been extensively studied to develop an understanding of how real world networks evolve over time. Two important…

Social and Information Networks · Computer Science 2017-01-23 Muhammad Qasim Pasta , Faraz Zaidi

Hypergraph is a topological model for networks. In order to study the topology of hypergraphs, the homology of the associated simplicial complexes and the embedded homology have been invented. In this paper, we give some algorithms to…

Algebraic Topology · Mathematics 2018-01-03 Shiquan Ren , Chengyuan Wu , Stephane Bressan , Jie Wu

We develop a machine learning algorithm to turn around stratification in Monte Carlo sampling. We use a different way to divide the domain space of the integrand, based on the height of the function being sampled, similar to what is done in…

High Energy Physics - Phenomenology · Physics 2024-12-19 Kayoung Ban , Myeonghun Park , Raymundo Ramos

We provide a novel family of generative block-models for random graphs that naturally incorporates degree distributions: the block-constrained configuration model. Block-constrained configuration models build on the generalised…

Physics and Society · Physics 2021-02-24 Giona Casiraghi

The fractal nature of graphs has traditionally been investigated by using the nodes of networks as the basic units. Here, instead, we propose to concentrate on the graph edges, and introduce a practical and computationally not demanding…

Physics and Society · Physics 2017-04-05 Sarika Jalan , Alok Yadav , Camellia Sarkar , Stefano Boccaletti

Complex network theory aims to model and analyze complex systems that consist of multiple and interdependent components. Among all studies on complex networks, topological structure analysis is of the most fundamental importance, as it…

Social and Information Networks · Computer Science 2010-09-15 Bo Yang , Jiming Liu

Heterogeneous graph neural networks (HGNNs) have demonstrated strong capability in modeling complex semantics across multi-type nodes and relations. However, their scalability to large-scale graphs remains challenging due to structural…

Machine Learning · Computer Science 2025-12-12 Fuyan Ou , Siqi Ai , Yulin Hu

Monte Carlo methods are widely used importance sampling techniques for studying complex physical systems. Integrating these methods with deep learning has significantly improved efficiency and accuracy in high-dimensional problems and…

Disordered Systems and Neural Networks · Physics 2024-12-24 Yixiong Ren , Jianhui Zhou

All networks can be analyzed at multiple scales. A higher scale of a network is made up of macro-nodes: subgraphs that have been grouped into individual nodes. Recasting a network at higher scales can have useful effects, such as decreasing…

Social and Information Networks · Computer Science 2022-02-18 Ross Griebenow , Brennan Klein , Erik Hoel

We propose a new framework for how to use sequential Monte Carlo (SMC) algorithms for inference in probabilistic graphical models (PGM). Via a sequential decomposition of the PGM we find a sequence of auxiliary distributions defined on a…

Methodology · Statistics 2014-10-07 Christian A. Naesseth , Fredrik Lindsten , Thomas B. Schön

Monte Carlo (MC) simulations of many systems, in particular those with conflicting constraints, can be considerably speeded up by using multicanonical or related methods. Some of these approaches sample with a-priori unknown weight factors.…

High Energy Physics - Lattice · Physics 2009-10-30 Bernd A. Berg

Boolean networks have been used in a variety of settings, as models for general complex systems as well as models of specific systems in diverse fields, such as biology, engineering, and computer science. Traditionally, their properties as…

Dynamical Systems · Mathematics 2024-02-02 Matthew Wheeler , Claus Kadelka , Alan Veliz-Cuba , David Murrugarra , Reinhard Laubenbacher

Graphs are used to represent and analyze data in domains as diverse as physics, biology, chemistry, planetary science, and the social sciences. Across domains, random graph models relate generative processes to expected graph properties,…

Physics and Society · Physics 2025-09-12 Cole Mathis , Harrison B. Smith
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