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Related papers: Nonlinear waves in double-stranded DNA

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Mass-loss and radiation feedback from evolving massive stars produce galactic-scale superwinds, sometimes surrounded by pressure-driven bubbles. Using the time-dependent stellar population typically seen in star-forming regions, we conduct…

Astrophysics of Galaxies · Physics 2024-06-27 A. Danehkar , M. S. Oey , W. J. Gray

Antibubbles, which consist of a shell of a low-density fluid inside a high-density fluid, have several promising applications. We show, via extensive direct numerical simulations (DNSs), in both two and three dimensions (2D and 3D), that…

Fluid Dynamics · Physics 2021-04-01 Nairita Pal , Rashmi Ramadugu , Prasad Perlekar , Rahul Pandit

The data of simultaneous measurements of the surface displacement produced by propagating planar waves in experimental flume and of the dynamic pressure beneath the waves are compared with the theoretical predictions based on different…

Fluid Dynamics · Physics 2022-04-06 A. V. Slunyaev , A. V. Kokorina , M. Klein

This paper discusses aspects of the second order hyperbolic partial differential equation associated with the ideal lossless string under tension and it's relationship to two discrete models. These models are finite differencing in the time…

Computational Physics · Physics 2007-05-23 Georg Essl

Diffraction phenomena usually can be formulated in terms of a potential that induces the redistribution of a wave's momentum. Using an atomic Bose-Einstein condensate coupled to the orbitals of a state-selective optical lattice, we…

Quantum Gases · Physics 2015-08-26 Jeremy Reeves , Ludwig Krinner , Michael Stewart , Arturo Pazmiño , Dominik Schneble

We propose a new simple model for DNA denaturation bases on the pendulum model of Englander\cite{A1} and the microscopic model of Peyrard {\it et al.},\cite{A3} so called "combined model". The main parameters of our model are: the coupling…

Biological Physics · Physics 2007-08-23 D. L. Hien , N. T. Nhan , V. Thanh Ngo , N. A. Viet

Nonlinear electrodynamics model in hypercomplex form is considered. Its linearization around a solution is obtained. The appropriate problem for linear waves around static dyon solution (SDS) of Born-Infeld electrodynamics is investigated.…

High Energy Physics - Theory · Physics 2007-05-23 Alexander A. Chernitskii

Fluid phase equilibria involving nano-dispersed phases, where at least one of the coexisting phases is confined to a small volume, are investigated by molecular dynamics simulation. Complementing previous studies on nanoscopic droplets,…

Mesoscale and Nanoscale Physics · Physics 2013-07-23 Martin Horsch , Hans Hasse

In the study on nonlinear wave-wave processes in an ionosphere and a magnetosphere usually the main attention is paid to investigation of plasma turbulence at well developed stage, when the wide spectrum of plasma wave is present. On the…

Plasma Physics · Physics 2009-11-13 A. S. Volokitin , B. Atamaniuk

We are concerned with the dynamical behavior of solutions to semilinear wave systems with time-varying damping and nonconvex force potential. Our result shows that the dynamical behavior of solution is asymptotically stable without any…

Analysis of PDEs · Mathematics 2025-06-17 Zhe Jiao , Yong Xu , Lijing Zhao

In order to identify the exact criteria for the formation of two-ring structures in galaxies, we studied the issue of gravitational instability of the corresponding structural vibration modes against the background of a composite disk model…

Astrophysics of Galaxies · Physics 2021-09-29 K. T. Mirtadjieva , K. A. Mannapova

Despite its relevance in biology and engineering, the molecular mechanism driving cavitation in water remains unknown. Using computer simulations, we investigate the structure and dynamics of vapor bubbles emerging from metastable water at…

Bubble nucleation in water induced by boiling, gas supersaturation or cavitation usually originates from pre-existing gas cavities trapped into solid defects. Even though the destabilization of such gas pockets, called nuclei, has been…

Fluid Dynamics · Physics 2020-02-19 Adrien Bussonnière , Qingxia Liu , Peichun Amy Tsai

By a refinement of the technique used by Johnson and Zumbrun to show stability under localized perturbations, we show that spectral stability implies nonlinear modulational stability of periodic traveling-wave solutions of reaction…

Analysis of PDEs · Mathematics 2015-05-28 Mathew Johnson , Pascal Noble , L. Miguel Rodrigues , Kevin Zumbrun

The response of a short DNA segment to bending is studied, taking into account the anisotropy in the bending rigidities caused by the double-helical structure. It is shown that the anisotropy introduces an effective nonlinear twist-bend…

Soft Condensed Matter · Physics 2015-06-24 Farshid Mohammad-Rafiee , Ramin Golestanian

It is shown that information transmission inside a cell can occur by means of mechanical waves transmitted through DNA. The propagation of the waves is strongly dependent on the shape of the DNA thus proteins that change the shape of DNA…

Biological Physics · Physics 2007-05-23 Thomas C. Bishop , Oleksandr O. Zhmudsky

In this paper, a general model of wireless channels is established based on the physics of wave propagation. Then the problems of inverse scattering and channel prediction are formulated as nonlinear filtering problems. The solutions to the…

Data Analysis, Statistics and Probability · Physics 2015-06-26 Haiqing Wei

We study numerically the mechanical stability and elasticity properties of duplex DNA molecules within the frame of a network model incorporating microscopic degrees of freedom related with the arrangement of the base pairs. We pay special…

Pattern Formation and Solitons · Physics 2015-06-26 D. Hennig , J. F. R. Archilla

Linear time-domain simulations of acoustic oscillations are unstable in the stellar convection zone. To overcome this problem it is customary to compute the oscillations of a stabilized background stellar model. The stabilization, however,…

Solar and Stellar Astrophysics · Physics 2013-12-17 Emanuele Papini , Laurent Gizon , Aaron C. Birch

We present a general linear dispersion relation which describes the coupled behavior of magnetorotational, photon bubble, and convective instabilities in weakly magnetized, differentially rotating accretion disks. We presume the accretion…

Astrophysics · Physics 2009-10-31 Omer Blaes , Aristotle Socrates