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We present an efficient and exact Monte Carlo algorithm to simulate reversible aggregation of particles with dedicated binding sites. This method introduces a novel data structure of dynamic bond tree to record clusters and sequences of…

Quantitative Methods · Quantitative Biology 2011-09-27 Qiang Chang , Jin Yang

The Binder ratios exhibit discrepancy from the Gaussian behavior of the magnetic cumulants, and their size independence at the critical point has been widely utilized in numerical studies of critical phenomena. In the present article we…

Statistical Mechanics · Physics 2018-02-05 Yoshihiko Nonomura , Yusuke Tomita

Generative approaches to clustering provide information on geometric properties of clusters, whereas discriminative approaches provide boundaries between clusters. Ideas from both approaches are incorporated to present a fully unsupervised,…

Machine Learning · Statistics 2026-04-28 Mackenzie R. Neal , Paul D. McNicholas , Arthur White

This paper investigates the parallel complexity of several non-equilibrium growth models. Invasion percolation, Eden growth, ballistic deposition and solid-on-solid growth are all seemingly highly sequential processes that yield…

Condensed Matter · Physics 2009-10-22 J. Machta , R. Greenlaw

Text Clustering is a text mining technique which divides the given set of text documents into significant clusters. It is used for organizing a huge number of text documents into a well-organized form. In the majority of the clustering…

Information Retrieval · Computer Science 2015-03-12 G. Hannah Grace , Kalyani Desikan

Spectral clustering techniques are valuable tools in signal processing and machine learning for partitioning complex data sets. The effectiveness of spectral clustering stems from constructing a non-linear embedding based on creating a…

Machine Learning · Computer Science 2021-02-02 Farhad Pourkamali-Anaraki

Clustering high-dimensional data is especially challenging when cluster distributions are heavy tailed and only approximately elliptical. Existing high-dimensional methods are largely built for Gaussian or other light-tailed models, whereas…

Methodology · Statistics 2026-05-12 Long Feng , Dan Zhuang

We evaluate the dependence of the cluster correlation length r_c on the mean intercluster separation D_c, for three models with critical matter density, vanishing vacuum energy (Lambda = 0) and COBE normalized: a tilted CDM (tCDM) model…

Astrophysics · Physics 2009-10-31 A. Gardini , S. A. Bonometto , G. Murante , G. Yepes

Obtaining a rigorous and reliable method for linking computer simulations of polymer blends and composites at different length scales of interest is a highly desirable goal in soft matter physics. In this paper a multiscale modeling…

Soft Condensed Matter · Physics 2015-05-19 J. McCarty , M. G. Guenza

Clustering is a crucial tool for analyzing data in virtually every scientific and engineering discipline. There are more scalable solutions framed to enable time and space clustering for the future large-scale data analyses. As a result,…

Databases · Computer Science 2023-08-23 D. D. D. Suribabu , T. Hitendra Sarma , B. Eswar Reddy

In many modern applications, there is interest in analyzing enormous data sets that cannot be easily moved across computers or loaded into memory on a single computer. In such settings, it is very common to be interested in clustering.…

Computation · Statistics 2020-05-15 Hanyu Song , Yingjian Wang , David B. Dunson

Spectral clustering is a powerful unsupervised machine learning algorithm for clustering data with non convex or nested structures. With roots in graph theory, it uses the spectral properties of the Laplacian matrix to project the data in a…

Quantum Physics · Physics 2021-06-15 Iordanis Kerenidis , Jonas Landman

A novel family of twelve mixture models with random covariates, nested in the linear $t$ cluster-weighted model (CWM), is introduced for model-based clustering. The linear $t$ CWM was recently presented as a robust alternative to the better…

Computation · Statistics 2015-03-10 Salvatore Ingrassia , Simona C. Minotti , Antonio Punzo

We review efficient Monte Carlo methods for simulating quantum systems which couple to a dissipative environment. A brief introduction of the Caldeira-Leggett model and the Monte Carlo method will be followed by a detailed discussion of…

Statistical Mechanics · Physics 2009-11-11 Philipp Werner , Matthias Troyer

Correlation clustering is a widely studied framework for clustering based on pairwise similarity and dissimilarity scores, but its best approximation algorithms rely on impractical linear programming relaxations. We present faster…

Data Structures and Algorithms · Computer Science 2022-06-27 Nate Veldt

Biclustering is used for simultaneous clustering of the observations and variables when there is no group structure known \textit{a priori}. It is being increasingly used in bioinformatics, text analytics, etc. Previously, biclustering has…

Methodology · Statistics 2020-09-14 Wangshu Tu , Sanjeena Subedi

Following the work of arXiv:2101.09512, we are interested in clustering a given multi-variate series in an unsupervised manner. We would like to segment and cluster the series such that the resulting blocks present in each cluster are…

Clustering is a fundamental data mining tool that aims to divide data into groups of similar items. Generally, intuition about clustering reflects the ideal case -- exact data sets endowed with flawless dissimilarity between individual…

Machine Learning · Computer Science 2016-01-25 Margareta Ackerman , Jarrod Moore

A mixture of multivariate contaminated normal (MCN) distributions is a useful model-based clustering technique to accommodate data sets with mild outliers. However, this model only works when fitted to complete data sets, which is often not…

Methodology · Statistics 2020-12-11 Hung Tong , Cristina Tortora

Spectral clustering is a celebrated algorithm that partitions objects based on pairwise similarity information. While this approach has been successfully applied to a variety of domains, it comes with limitations. The reason is that there…

Statistics Theory · Mathematics 2018-05-24 Kwangjun Ahn , Kangwook Lee , Changho Suh
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