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We consider an inextensible, semiflexible polymer or worm-like chain which is confined in the transverse direction by a parabolic potential and subject to a longitudinal force at the ends, so that the polymer is stretched out and…

Soft Condensed Matter · Physics 2015-05-28 Theodore W. Burkhardt

The segment distribution around the center of gravity is derived for unperturbed ring polymers. We show that, although a small difference is observed, the exact distribution can be well approximated by the Gaussian probability distribution…

Soft Condensed Matter · Physics 2022-06-28 Kazumi Suematsu , Haruo Ogura , Seiichi Inayama , Toshihiko Okamoto

Some recent results on the rotational dynamics of polymers are reviewed and extended. We focus here on the relaxation of a polymer, either flexible or semiflexible, initially wrapped around a rigid rod. We also study the steady polymer…

Statistical Mechanics · Physics 2015-06-22 Jean-Charles Walter , Michiel Laleman , Marco Baiesi , Enrico Carlon

Macroscopic mechanical properties of polymers are determined by their microscopic molecular chain distribution. Due to randomness of these molecular chains, probability theory has been used to find their micro-states and energy…

Statistical Mechanics · Physics 2023-08-23 Lixiang Yang

We study analytically and numerically the winding of directed polymers of length $t$ around each other or around a rod. Unconfined polymers in pure media have exponentially decaying winding angle distributions, the decay constant depending…

Statistical Mechanics · Physics 2008-02-03 Barbara Drossel , Mehran Kardar

The statistics of polymers advected by a turbulent flow are investigated. To limit the polymer lengths above to coil-stretch transition, a FENE-P type relaxation law is used. The turbulence is modeled by a random strain, delta-correlated in…

Chaotic Dynamics · Physics 2009-11-07 Jean-Luc Thiffeault

We show the presence of both a minimum and clear oscillations in the frequency dependence of the translocation time of a polymer described as a unidimensional Rouse chain driven by a spatially localized oscillating linear potential. The…

Soft Condensed Matter · Physics 2010-09-16 Alessandro Fiasconaro , Juan José Mazo , Fernando Falo

Using the Onsager-Machlup functional integral approach, we obtain the work distribution function and the distribution of the dissipated heat of a Brownian particle subjected to a confining harmonic potential and an oscillatory driving…

Statistical Mechanics · Physics 2016-01-29 Bappa Saha , Sutapa Mukherji

We study the mechanical properties of semiflexible polymers when the contour length of the polymer is comparable to its persistence length. We compute the exact average end-to-end distance and shape of the polymer for different boundary…

Biomolecules · Quantitative Biology 2013-05-29 Yuko Hori , Ashok Prasad , Jane' Kondev

The distribution of the performed work for spin glasses with gauge symmetry is considered. With the aid of the gauge symmetry, which leads to the exact/rigorous results in spin glasses, we find a fascinating relation of the performed work…

Disordered Systems and Neural Networks · Physics 2015-06-11 Masayuki Ohzeki

The interaction of polymers with small-scale velocity gradients can trigger a coil-stretch transition in the polymers. We analyze this transition within a direct numerical simulation of shear turbulence with an Oldroyd-B model for the…

Chaotic Dynamics · Physics 2009-11-07 Bruno Eckhardt , Jochen Kronjaeger , Joerg Schumacher

Polymer stretching in random smooth flows is investigated within the framework of the FENE dumbbell model. The advecting flow is Gaussian and short-correlated in time. The stationary probability density function of polymer extension is…

Chaotic Dynamics · Physics 2007-05-23 M. Martins Afonso , D. Vincenzi

When injected through a contraction, high molecular weight polymer solutions exhibit a sharp increase of apparent viscosity which originates from stretching polymer chains above a critical extension rate. This chain stretching can also…

Fluid Dynamics · Physics 2020-04-22 Sandeep Garrepally , Stephane Jouenne , Peter D. Olmsted , Francois Lequeux

Inhomogeneous polymers play an important role in various cellular processes, both in nature and in biotechnological applications. At finite temperatures, inhomogeneous polymers exhibit non-trivial thermal fluctuations. In a broader context,…

Statistical Mechanics · Physics 2017-02-02 Yohai Bar-Sinai , Eran Bouchbinder

Considering the dynamics of a polymer with finite extensibility placed in a chaotic flow with large mean shear, we explain how the statistics of polymer extension changes with Weissenberg number, ${\it Wi}$, defined as the product of the…

Statistical Mechanics · Physics 2007-05-23 M. Chertkov , I. Kolokolov , V. Lebedev , K. Turitsyn

We present a Brownian dynamics theory with full hydrodynamics (Stokesian dynamics) for a Gaussian polymer chain embedded in a liquid membrane which is surrounded by bulk solvent and walls. The mobility tensors are derived in Fourier space…

Soft Condensed Matter · Physics 2011-04-04 Sanoop Ramachandran , Shigeyuki Komura , Kazuhiko Seki , Gerhard Gompper

The excluded volume effects of randomly branched polymers are investigated. To approach this problem we assume the Gaussian distribution of segments around the center of gravity. Once this approximation is introduced, we can make use of the…

Soft Condensed Matter · Physics 2017-09-27 Kazumi Suematsu

The explicit expression for the the probability distribution function of the endpoint fluctuations of one-dimensional directed polymers in random potential is derived in terms of the Bethe ansatz replica technique by mapping the replicated…

Statistical Mechanics · Physics 2015-06-11 Victor Dotsenko

We develop a strong stretching approximation for a polymer brush made of self-avoiding polymer chains. The density profile of the brush and the distribution of the end monomer positions in stretching direction are computed and compared with…

Soft Condensed Matter · Physics 2021-05-26 Dirk Romeis , Michael Lang

We study the stress distribution in a polymer brush material over a range of graft densities using molecular dynamics (MD) simulations and theory. Flexible polymer chains are treated as beads connected by nonlinear springs governed by a…

Applied Physics · Physics 2019-03-27 M. Manav , M. Ponga , A. Srikantha Phani