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A typical complex system should be described by a supernetwork or a network of networks, in which the networks are coupled to some other networks. As the first step to understanding the complex systems on such more systematic level,…

Physics and Society · Physics 2015-05-20 Xiu-Lian Xu , Yan-Qin Qu , Shan Guan , Yu-Mei Jiang , Da-Ren He

Network embedding is an effective method to learn low-dimensional representations of nodes, which can be applied to various real-life applications such as visualization, node classification, and link prediction. Although significant…

Machine Learning · Computer Science 2020-03-31 Shixun Huang , Zhifeng Bao , Guoliang Li , Yanghao Zhou , J. Shane Culpepper

In practice, many medical datasets have an underlying taxonomy defined over the disease label space. However, existing classification algorithms for medical diagnoses often assume semantically independent labels. In this study, we aim to…

Computer Vision and Pattern Recognition · Computer Science 2022-09-14 Zhen Yu , Toan Nguyen , Yaniv Gal , Lie Ju , Shekhar S. Chandra , Lei Zhang , Paul Bonnington , Victoria Mar , Zhiyong Wang , Zongyuan Ge

The statistical mechanical approach to complex networks is the dominant paradigm in describing natural and societal complex systems. The study of network properties, and their implications on dynamical processes, mostly focus on locally…

Statistical Mechanics · Physics 2013-06-27 Giovanni Petri , Martina Scolamiero , Irene Donato , Francesco Vaccarino

The intricate relations between elements in natural and human-made systems sustain the complex processes that shape our world, forming multiscale networks of interactions. These networks can be represented as graphs composed of nodes…

Disordered Systems and Neural Networks · Physics 2026-03-20 M. Ángeles Serrano

In this Master's thesis, the graph properties of a multi-level drug-protein network are studied, as well as how the network's shape has informed discoveries over the years, identifying primarily crawling discoveries and a smaller number of…

Molecular Networks · Quantitative Biology 2026-03-02 Felipe Bivort Haiek

Network data is ubiquitous in various scientific disciplines, including sociology, economics, and neuroscience. Latent space models are often employed in network data analysis, but the geometric effect of latent space curvature remains a…

Methodology · Statistics 2026-02-11 Jinming Li , Gongjun Xu , Ji Zhu

Low-dimensional embeddings, from classical spectral embeddings to modern neural-net-inspired methods, are a cornerstone in the modeling and analysis of complex networks. Recent work by Seshadhri et al. (PNAS 2020) suggests that such…

Machine Learning · Computer Science 2020-10-19 Sudhanshu Chanpuriya , Cameron Musco , Konstantinos Sotiropoulos , Charalampos E. Tsourakakis

Learning graph representations via low-dimensional embeddings that preserve relevant network properties is an important class of problems in machine learning. We here present a novel method to embed directed acyclic graphs. Following prior…

Machine Learning · Computer Science 2018-06-08 Octavian-Eugen Ganea , Gary Bécigneul , Thomas Hofmann

Conventional network data has largely focused on pairwise interactions between two entities, yet multi-way interactions among multiple entities have been frequently observed in real-life hypergraph networks. In this article, we propose a…

Machine Learning · Statistics 2021-09-06 Yaoming Zhen , Junhui Wang

Representation learning of networks has witnessed significant progress in recent times. Such representations have been effectively used for classic network-based machine learning tasks like node classification, link prediction, and network…

Social and Information Networks · Computer Science 2018-12-07 Arunkumar Bagavathi , Siddharth Krishnan

To understand the formation, evolution, and function of complex systems, it is crucial to understand the internal organization of their interaction networks. Partly due to the impossibility of visualizing large complex networks, resolving…

Physics and Society · Physics 2011-11-30 Takashi Nishikawa , Adilson E. Motter

Recently, considerable research attention has been paid to network embedding, a popular approach to construct feature vectors of vertices. Due to the curse of dimensionality and sparsity in graphical datasets, this approach has become…

Machine Learning · Computer Science 2018-11-15 Xi Liu , Ping-Chun Hsieh , Nick Duffield , Rui Chen , Muhe Xie , Xidao Wen

We explore in depth how categorical data can be processed with embeddings in the context of claim severity modeling. We develop several models that range in complexity from simple neural networks to state-of-the-art attention based…

Applications · Statistics 2021-04-09 Kevin Kuo , Ronald Richman

In recent years, network embedding methods have garnered increasing attention because of their effectiveness in various information retrieval tasks. The goal is to learn low-dimensional representations of vertexes in an information network…

Social and Information Networks · Computer Science 2017-11-02 Chih-Ming Chen , Yi-Hsuan Yang , Yian Chen , Ming-Feng Tsai

Heterogeneous networks are widely used to model real-world semi-structured data. The key challenge of learning over such networks is the modeling of node similarity under both network structures and contents. To deal with network…

Social and Information Networks · Computer Science 2019-10-04 Carl Yang , Mengxiong Liu , Frank He , Xikun Zhang , Jian Peng , Jiawei Han

High-throughput techniques are leading to an explosive growth in the size of biological databases and creating the opportunity to revolutionize our understanding of life and disease. Interpretation of these data remains, however, a major…

Molecular Networks · Quantitative Biology 2009-11-11 Roger Guimera , Luis A. Nunes Amaral

Embedding static graphs in low-dimensional vector spaces plays a key role in network analytics and inference, supporting applications like node classification, link prediction, and graph visualization. However, many real-world networks…

Machine Learning · Computer Science 2021-07-23 Claudio D. T. Barros , Matheus R. F. Mendonça , Alex B. Vieira , Artur Ziviani

The relations, rather than the elements, constitute the structure of networks. We therefore develop a systematic approach to the analysis of networks, modelled as graphs or hypergraphs, that is based on structural properties of…

Discrete Mathematics · Computer Science 2020-12-08 Marzieh Eidi , Amirhossein Farzam , Wilmer Leal , Areejit Samal , Jürgen Jost

Recent progress towards unraveling the hidden geometric organization of real multiplexes revealed significant correlations across the hyperbolic node coordinates in different network layers, which facilitated applications like trans-layer…

Social and Information Networks · Computer Science 2019-01-29 Fragkiskos Papadopoulos , Kaj-Kolja Kleineberg
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