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Related papers: Hole interactions with molecular vibrations on DNA

200 papers

We predict a novel temperature-driven phase transition of DNA below the melting transition. The additional, intermediate phase exists for repetitive sequences, when the two strands have different lengths. In this phase, the excess bases of…

Biomolecules · Quantitative Biology 2007-05-23 Richard A. Neher , Ulrich Gerland

Understanding carrier trapping in solids has proven key to semiconductor technologies but observations thus far have relied on ensembles of point defects, where the impact of neighboring traps or carrier screening is often important. Here,…

Mesoscale and Nanoscale Physics · Physics 2023-06-05 Artur Lozovoi , YunHeng Chen , Gyorgy Vizkelethy , Edward Bielejec , Johannes Flick , Marcus W. Doherty , Carlos A. Meriles

In this paper we examine the effects of electron-hole asymmetry as a consequence of strong correlations on the electronic Raman scattering in the normal state of copper oxide high temperature superconductors. Using determinant quantum Monte…

Strongly Correlated Electrons · Physics 2012-05-11 B. Moritz , S. Johnston , T. P. Devereaux , B. Muschler , W. Prestel , R. Hackl , M. Lambacher , A. Erb , Seiki Komiya , Yoichi Ando

The random hopping models exhibit many fascinating features, such as diverging localization length and density of states as energy approaches the bandcenter, due to its particle-hole symmetry. Nevertheless, such models are yet to be…

Quantum Gases · Physics 2012-02-22 Yue Zou , Ryan Barnett , Gil Refael

We study the optical properties of thin flakes of InSe encapsulated in hBN. More specifically, we investigate the photoluminescence (PL) emission and its dependence on sample thickness and temperature. Through the analysis of the PL…

Understanding how soft matter systems, including biological ones, can develop collective electromagnetic phenomena under external fields at ambient conditions remains a central challenge, as thermal fluctuations are generally expected to…

Biological Physics · Physics 2026-01-21 Mariusz Pietruszka

In a semiconductor heterostructure with type II energy band alignment, the spatial separation between electrons and holes slows down their radiative recombination. With increasing excitation intensity, Auger recombination quickly becomes…

Materials Science · Physics 2008-09-09 E. -K. Lee , D. J. Lockwood , J. -M. Baribeau , A. M. Bratkovsky , T. I. Kamins , L. Tsybeskov

The coherent spin dynamics of electrons and holes are studied in a FA0.9Cs0.1PbI2.8Br0.2 perovskite bulk crystal, using time-resolved Kerr ellipticity in a two-color pump-probe scheme. The probe photon energy is tuned to the exciton…

We investigate the non-equilibrium mechanical motion of double-stranded DNA in a molecular junction under electronic current using Keldysh-Langevin molecular dynamics. Non-equilibrium electronic force reshapes the effective potential energy…

Mesoscale and Nanoscale Physics · Physics 2025-10-29 Julian A. Lawn , Nicholas S. Davis , Daniel S. Kosov

DNA-gold nanoparticle assemblies have shown promise as an alternative technology to DNA microarrays for DNA detection and RNA profiling. Understanding the effect of DNA sequences on the melting temperature of the system is central to…

Biological Physics · Physics 2007-07-09 Nolan C. Harris , Ching-Hwa Kiang

Circular double stranded DNA has different topological states which are defined by their linking numbers. Equilibrium distribution of linking numbers can be obtained by closing a linear DNA into a circle by ligase. Using Monte Carlo…

Biomolecules · Quantitative Biology 2009-05-04 Hu Chen , Yanhui Liu , Zhen Zhou , Lin Hu , Zhong-Can Ou-Yang , Jie Yan

Thermophoresis moves molecules along temperature gradients, typically from hot to cold. We superpose fluid flow with thermophoretic molecule flow under well defined microfluidic conditions, imaged by fluorescence microscopy. DNA is trapped…

Biological Physics · Physics 2007-05-23 Stefan Duhr , Dieter Braun

It has been theoretically shown that in large-density semiconductor plasma there exist an energy level of a bound electron-hole pair (a composite boson) at the band gap. Filling this level up occurs through the condensation of electron-hole…

Strongly Correlated Electrons · Physics 2009-11-11 Peter P. Vasil'ev , Igor V. Smetenin

We study the damping of molecular vibrations due to electron-hole pair excitations in donor-acceptor(D-A) type molecular rectifiers. At finite voltage additional non-equilibrium electron-hole pair excitations involving both electrodes…

Mesoscale and Nanoscale Physics · Physics 2011-07-22 Jing-Tao Lü , Per Hedegård , Mads Brandbyge

Structuring of DNA counterions around the double helix has been studied by the molecular dynamics method. A DNA dodecamer d(CGCGAATTCGCG) in water solution with the alkali metal counterions Na$^{+}$, K$^{+}$, and Cs$^{+}$ has been…

Biomolecules · Quantitative Biology 2015-03-19 O. O. Liubysh , A. V. Vlasiuk , S. M. Perepelytsya

We study the core hole-electron correlation in coherently coupled molecules by energy dispersive near edge X-ray absorption fine-structure spectroscopy. In a transient phase, which exists during the transition between two bulk arrangements,…

Materials Science · Physics 2013-12-03 M. Scholz , F. Holch , C. Sauer , M. Wiessner , A. Schöll , F. Reinert

After photo-excitation of DNA, the excited electron (in the LUMO) and the remaining hole (in the HOMO) localized on the same DNA base form a bound pair, called the Frenkel exciton, due to their mutual Coulomb interaction. In this study, we…

Chemical Physics · Physics 2024-02-28 D. Herb , M. Rossini , J. Ankerhold

We present a self-consistent treatment of the electron-hole correlations in optically excited quantum wires within the ladder approximation, and using a contact potential interaction. The limitations of the ladder approximation to the…

Condensed Matter · Physics 2009-10-31 Francesco Tassone , Carlo Piermarocchi

We report the results of molecular dynamics simulation of a spatiotemporal evolution of the locally photoexcited electrons and holes localized in two separate layers. It is shown that the ring-shaped spatial pattern of luminescence forms…

Mesoscale and Nanoscale Physics · Physics 2017-05-24 A. V. Paraskevov , S. E. Savel'ev

We employ few-femtosecond extreme ultraviolet (XUV) transient absorption spectroscopy to reveal simultaneously the intra- and interband carrier relaxation and the light-induced structural dynamics in nanoscale thin films of layered…