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Patterns are ubiquitous in nature, but how they form is often unclear. Turing developed a seminal theory to explain patterns based on reactions that counteract the equalizing tendency of diffusion. These reactions require continuous energy…

Biological Physics · Physics 2025-11-24 Cathelijne ter Burg , David Zwicker

Subordinated processes play an important role in modeling anomalous diffusion-type behavior. In such models the observed constant time periods are described by the subordinator distribution. Therefore, on the basis of the observed time…

Mathematical Physics · Physics 2011-10-14 Joanna Janczura , Agnieszka Wyłomańska

An asymptotic method for finding instabilities of arbitrary $d$-dimensional large-amplitude patterns in a wide class of reaction-diffusion systems is presented. The complete stability analysis of 2- and 3-dimensional localized patterns is…

patt-sol · Physics 2009-10-30 C. B. Muratov , V. V. Osipov

Reaction networks are commonly used to model the evolution of populations of species subject to transformations following an imposed stoichiometry. This paper focuses on the efficient characterisation of dynamical properties of Discrete…

Discrete Mathematics · Computer Science 2013-07-15 Loïc Paulevé , Gheorghe Craciun , Heinz Koeppl

We analyze random networks that change over time. First we analyze a dynamic Erdos-Renyi model, whose edges change over time. We describe its stationary distribution, its convergence thereto, and the SI contact process on the network, which…

Probability · Mathematics 2015-03-19 Benjamin Armbruster , John Gunnar Carlsson

We introduce a random bit-string model of post-transcriptional genetic regulation based on sequence matching. The model spontaneously yields a scale free network with power law scaling with $ \gamma=-1$ and also exhibits log-periodic…

Genomics · Quantitative Biology 2009-11-10 Duygu Balcan , Ayse Erzan

Many complex networks in nature have directed links, a property that affects the network's navigability and large-scale topology. Here we study the percolation properties of such directed scale-free networks with correlated in- and…

Disordered Systems and Neural Networks · Physics 2009-11-07 N. Schwartz , R. Cohen , D. ben-Avraham , A. -L. Barabasi , S. Havlin

Adaptive networks consist of a collection of nodes with adaptation and learning abilities. The nodes interact with each other on a local level and diffuse information across the network to solve estimation and inference tasks in a…

Information Theory · Computer Science 2015-06-05 Sheng-Yuan Tu , Ali H. Sayed

Many animals have patterned fur, feathers, or scales, such as the stripes of a zebra. Turing models, or reaction-diffusion systems, are a class of mathematical models of interacting species that have been successfully used to generate…

Biological Physics · Physics 2023-12-04 Michael F. Staddon

Scaling behavior of scale-free evolving networks arising in communications, citations, collaborations, etc. areas is studied. We derive universal scaling relations describing properties of such networks and indicate limits of their…

Condensed Matter · Physics 2009-10-31 S. N. Dorogovtsev , J. F. F. Mendes

We study reaction zones in three different versions of the A+B->0 system. For a steady state formed by opposing currents of A and B particles we derive scaling behavior via renormalization group analysis. By use of a previously developed…

Condensed Matter · Physics 2009-10-22 Benjamin P. Lee , John Cardy

Spreading phenomena on networks are essential for the collective dynamics of various natural and technological systems, from information spreading in gene regulatory networks to neural circuits or from epidemics to supply networks…

Physics and Society · Physics 2021-06-01 Justine Wolter , Benedict Lünsmann , Xiaozhu Zhang , Malte Schröder , Marc Timme

We study a large class of 1D reaction diffusion models with quenched disorder using a real space renormalization group method (RSRG) which yields exact results at large time. Particles (e.g. of several species) undergo diffusion with random…

Condensed Matter · Physics 2009-10-31 Pierre Le Doussal , Cecile Monthus

In this paper, a class of reaction-diffusion equations for Multiple Sclerosis is presented. These models are derived by means of a diffusive limit starting from a proper kinetic description, taking account of the underlying microscopic…

Quantitative Methods · Quantitative Biology 2026-01-07 Marzia Bisi , Maria Groppi , Giorgio Martalò , Romina Travaglini

Scale-free and non-computable characteristics of natural networks are found to result from the least-time dispersal of energy. To consider a network as a thermodynamic system is motivated since ultimately everything that exists can be…

General Physics · Physics 2011-06-22 Tuomo Hartonen , Arto Annila

Networks with long-range connections obeying a distance-dependent power law of sufficiently small exponent display superdiffusion, L\'evy flights and robustness properties very different from the scale-free networks. It has been proposed…

Adaptation and Self-Organizing Systems · Physics 2024-11-15 R. Vilela Mendes , Tanya Araújo

We study epidemic processes using a metapopulation approach on the line featuring random transport rates between arbitrarily distant sites. An average transport network is found using a recently developed variant of the effective medium…

Physics and Society · Physics 2018-10-17 Flavio Iannelli , Igor M. Sokolov , Felix Thiel

Pattern formation in reaction-diffusion systems where the diffusion terms correspond to a Sturm-Liouville problem are studied. These correspond to a problem where the diffusion coefficient depends on the spatial variable: $\nabla \cdot…

Pattern Formation and Solitons · Physics 2022-11-28 E. A. Calderón-Barreto , J. L. Aragón

Stochastic processes can model many emerging phenomena on networks, like the spread of computer viruses, rumors, or infectious diseases. Understanding the dynamics of such stochastic spreading processes is therefore of fundamental interest.…

Social and Information Networks · Computer Science 2019-01-07 Gerrit Großmann , Verena Wolf

We propose a kind of reaction-diffusion equations for cell differentiation, which exhibits the Turing instability. If the diffusivity of some variables is set to be infinity, we get coupled competitive reaction-diffusion equations with a…

Cell Behavior · Quantitative Biology 2015-05-13 Hidetsugu Sakaguchi