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Active biological flow networks pervade nature and span a wide range of scales, from arterial blood vessels and bronchial mucus transport in humans to bacterial flow through porous media or plasmodial shuttle streaming in slime molds.…

Biological Physics · Physics 2016-07-28 Francis G. Woodhouse , Aden Forrow , Joanna B. Fawcett , Jörn Dunkel

We show that subsets of interacting oscillators may synchronize in different ways within a single network. This diversity of synchronization patterns is promoted by increasing the heterogeneous distribution of coupling weights and/or…

Pattern Formation and Solitons · Physics 2017-04-05 Daniel Malagarriga , Alessandro E. P. Villa , Jordi García-Ojalvo , Antonio J. Pons

We study the effect of intrinsic noise on the thermodynamic balance of complex chemical networks subtending cellular metabolism and gene regulation. A topological network property called deficiency, known to determine the possibility of…

Molecular Networks · Quantitative Biology 2015-11-12 Matteo Polettini , Artur Wachtel , Massimiliano Esposito

We study emergent oscillatory behavior in networks of diffusively coupled nonlinear ordinary differential equations. Starting from a situation where each isolated node possesses a globally attracting equilibrium point, we give, for an…

Dynamical Systems · Mathematics 2023-08-22 Eddie Nijholt , Tiago Pereira , Fernando C. Queiroz , Dmitry Turaev

Following the financial crisis of 2007-2008, a deep analogy between the origins of instability in financial systems and complex ecosystems has been pointed out: in both cases, topological features of network structures influence how easily…

Risk Management · Quantitative Finance 2017-02-28 Marco Bardoscia , Stefano Battiston , Fabio Caccioli , Guido Caldarelli

The tools of weakly coupled phase oscillator theory have had a profound impact on the neuroscience community, providing insight into a variety of network behaviours ranging from central pattern generation to synchronisation, as well as…

Adaptation and Self-Organizing Systems · Physics 2016-04-05 Peter Ashwin , Stephen Coombes , Rachel Nicks

In a complex system, the interactions between individual agents often lead to emergent collective behavior like spontaneous synchronization, swarming, and pattern formation. The topology of the network of interactions can have a dramatic…

Adaptation and Self-Organizing Systems · Physics 2022-07-25 Mark J Panaggio , Maria-Veronica Ciocanel , Lauren Lazarus , Chad M Topaz , Bin Xu

Complexity in the temporal organization of neural systems may be a reflection of the diversity of its neural constituents. These constituents, excitatory and inhibitory neurons, comprise an invariant ratio in vivo and form the substrate for…

Neurons and Cognition · Quantitative Biology 2015-05-18 Xin Chen , Rhonda Dzakpasu

This work aims to propose and design a class of networks of coupled linear and nonlinear oscillators, in which short bursts of exogenous excitation result in sustained endogenous network activity that returns to a quiescent state only after…

Dynamical Systems · Mathematics 2023-09-07 Yu Mao , Harry Dankowicz

Although it is unambiguously agreed that structure plays a fundamental role in shaping the dynamics of complex systems, this intricate relationship still remains unclear. We investigate a general computational transformation by which we can…

Disordered Systems and Neural Networks · Physics 2015-05-13 Jie Zhang , Changsong Zhou , Xiaoke Xu , Michael Small

When a fluid comprised of multiple phases or constituents flows through a network, non-linear phenomena such as multiple stable equilibrium states and spontaneous oscillations can occur. Such behavior has been observed or predicted in a…

Fluid Dynamics · Physics 2015-06-05 Casey M. Karst , Brian D. Storey , John B. Geddes

Links in a practical network may have different functions, which makes the original network a combination of some functional subnetworks. Here, by a model of coupled oscillators, we investigate how such functional subnetworks are evolved…

Adaptation and Self-Organizing Systems · Physics 2015-05-13 Menghui Li , Xingang Wang , Choy-Heng Lai

Parameter space of a driven damped oscillator in a double well potential presents either a chaotic trajectory with sign oscillating amplitude or a non-chaotic trajectory with a fixed sign amplitude. A network of such delay coupled damped…

Chaotic Dynamics · Physics 2015-06-04 Y. Peleg , W. Kinzel , I. Kanter

Turing instability in activator-inhibitor systems provides a paradigm of nonequilibrium pattern formation; it has been extensively investigated for biological and chemical processes. Turing pattern formation should furthermore be possible…

Adaptation and Self-Organizing Systems · Physics 2010-05-13 Hiroya Nakao , Alexander S. Mikhailov

The tendency for flows in microfluidic systems to behave linearly poses a challenge for designing integrated flow control schemes to carry out complex fluid processing tasks. This hindrance has led to the use of numerous external control…

Fluid Dynamics · Physics 2020-06-18 Daniel J. Case , Jean-Regis Angilella , Adilson E. Motter

A quantitative evaluation of the contribution of individual units in producing the collective behavior of a complex network can allow us to understand the potential damage to the structure integrity due to the failure of local nodes. Given…

Physics and Society · Physics 2024-06-19 X. San Liang

Networked systems have been used to model and investigate the dynamical behavior of a variety of systems. For these systems, different levels of complexity can be considered in the modeling procedure. On one hand, this can offer a more…

Symmetries naturally occur in real-world networks and can significantly influence the observed dynamics. For instance, many synchronization patterns result from the underlying network symmetries, and high symmetries are known to increase…

Adaptation and Self-Organizing Systems · Physics 2021-09-03 Everton S Medeiros , Ulrike Feudel , Anna Zakharova

Complex networks describe a wide range of systems in nature and society, much quoted examples including the cell, a network of chemicals linked by chemical reactions, or the Internet, a network of routers and computers connected by physical…

Statistical Mechanics · Physics 2016-08-31 Reka Albert , Albert-Laszlo Barabasi

When a founder cell and its progeny divide with incomplete cytokinesis, a network forms in which each intercellular bridge corresponds to a past mitotic event. Networks built in this manner are required for gamete production in many…

Adaptation and Self-Organizing Systems · Physics 2023-05-24 Matthew Smart , Stanislav Shvartsman , Hayden Nunley