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A common feature of biological networks is the geometric property of self-similarity. Molecular regulatory networks through to circulatory systems, nervous systems, social systems and ecological trophic networks, show self-similar…

Molecular Networks · Quantitative Biology 2012-03-09 Simon DeDeo , David C. Krakauer

The topological (or graph) structures of real-world networks are known to be predictive of multiple dynamic properties of the networks. Conventionally, a graph structure is represented using an adjacency matrix or a set of hand-crafted…

Social and Information Networks · Computer Science 2016-10-21 Cheng Li , Xiaoxiao Guo , Qiaozhu Mei

Nonlinear biophysical properties of individual neurons are known to play a major role in the nervous system. Earlier electrophysiological studies have made use of piecewise linear characterization of voltage clamped neurons, which consists…

Neurons and Cognition · Quantitative Biology 2010-07-07 Christophe Magnani , L. E. Moore

Deep learning models are often considered black boxes due to their complex hierarchical transformations. Identifying suitable architectures is crucial for maximizing predictive performance with limited data. Understanding the geometric…

Machine Learning · Computer Science 2025-03-11 Michael Wienczkowski , Addisu Desta , Paschal Ugochukwu

Many natural and social systems develop complex networks, that are usually modelled as random graphs. The eigenvalue spectrum of these graphs provides information about their structural properties. While the semi-circle law is known to…

Statistical Mechanics · Physics 2009-11-07 Illes J. Farkas , Imre Derenyi , Albert-Laszlo Barabasi , Tamas Vicsek

An important problem in network analysis is predicting a node attribute using both network covariates, such as graph embedding coordinates or local subgraph counts, and conventional node covariates, such as demographic characteristics.…

Methodology · Statistics 2023-02-24 Robert Lunde , Elizaveta Levina , Ji Zhu

Temporal-network models have provided key insights into how time-varying connectivity shapes dynamical processes such as spreading. Among them, the activity-driven model is a widely used, analytically tractable benchmark. Yet many temporal…

Physics and Society · Physics 2025-11-20 Zsófia Simon , Jari Saramäki

We derive an exact representation of the topological effect on the dynamics of sequence processing neural networks within signal-to-noise analysis. A new network structure parameter, loopiness coefficient, is introduced to quantitatively…

Disordered Systems and Neural Networks · Physics 2008-05-11 Pan Zhang , Yong Chen

Spatially embedded networks have attracted increasing attention in the last decade. In this context, new types of network characteristics have been introduced which explicitly take spatial information into account. Among others, edge…

Physics and Society · Physics 2019-01-09 Frederik Wolf , Catrin Kirsch , Reik V. Donner

The functional features of spatial networks depend upon a non-trivial relationship between the topological and physical structure. Here, we explore that relationship for spatial networks with radial symmetry and disordered fractal…

Materials Science · Physics 2023-11-01 A. C. Flores-Ortega , J. R. Nicolás-Carlock , J. L. Carrillo-Estrada

We consider an excitatory random network of leaky integrate-and-fire pulse coupled neurons. The neurons are connected as in a directed Erd\"os-Renyi graph with average connectivity $<k>$ scaling as a power law with the number of neurons in…

Disordered Systems and Neural Networks · Physics 2012-08-28 Lorenzo Tattini , Simona Olmi , Alessandro Torcini

Over the last decade, random hyperbolic graphs have proved successful in providing geometric explanations for many key properties of real-world networks, including strong clustering, high navigability, and heterogeneous degree…

Physics and Society · Physics 2023-03-01 Béatrice Désy , Patrick Desrosiers , Antoine Allard

Neural circuits exhibit structured connectivity, including an overrepresentation of reciprocal connections between neuron pairs. Despite important advances, a full understanding of how such partial symmetry in connectivity shapes neural…

This article focuses on the problem of studying shared- and individual-specific structure in replicated networks or graph-valued data. In particular, the observed data consist of $n$ graphs, $G_i, i=1,\ldots,n$, with each graph consisting…

Computation · Statistics 2018-04-13 Lu Wang , Zhengwu Zhang , David Dunson

Various important and useful quantities or measures that characterize the topological network structure are usually investigated for a network, then they are averaged over the samples. In this paper, we propose an explicit representation by…

Physics and Society · Physics 2016-09-02 Yukio Hayashi

Concepts in a certain domain of science are linked via intrinsic connections reflecting the structure of knowledge. To get a qualitative insight and a quantitative description of this structure, we perform empirical analysis and modeling of…

Digital Libraries · Computer Science 2021-08-10 Vasyl Palchykov , Mariana Krasnytska , Olesya Mryglod , Yurij Holovatch

Complex systems of interacting components often can be modeled by a simple graph $\mathcal{G}$ that consists of a set of $n$ nodes and a set of $m$ edges. Such a graph can be represented by an adjacency matrix $A\in\R^{n\times n}$, whose…

Physics and Society · Physics 2025-09-17 Silvia Noschese , Lothar Reichel

Recent theoretical and empirical studies have focused on the structural properties of complex relational networks in social, biological and technological systems. Here we study the basic properties of twenty 1-square-mile samples of street…

Physics and Society · Physics 2009-11-11 Alessio Cardillo , Salvatore Scellato , Vito Latora , Sergio Porta

A law of large numbers for the empirical distribution of parameters of a one-layer artificial neural networks with sparse connectivity is derived for a simultaneously increasing number of both, neurons and training iterations of the…

Disordered Systems and Neural Networks · Physics 2021-12-13 Christian Hirsch , Matthias Neumann , Volker Schmidt

A fundamental problem in the study of complex networks is to provide quantitative measures of correlation and information flow between different parts of a system. To this end, several notions of communicability have been introduced and…

Physics and Society · Physics 2015-04-08 Ernesto Estrada , Naomichi Hatano , Michele Benzi