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Related papers: On the Aging Dynamics in an Immune Network Model

200 papers

Particle dynamics and multi-agent systems provide accurate dynamical models for studying and forecasting the behavior of complex interacting systems. They often take the form of a high-dimensional system of differential equations…

Machine Learning · Computer Science 2023-08-09 Yuxuan Liu , Scott G. McCalla , Hayden Schaeffer

Cellular regulatory dynamics is driven by large and intricate networks of interactions at the molecular scale, whose sheer size obfuscates understanding. In light of limited experimental data, many parameters of such dynamics are unknown,…

Quantitative Methods · Quantitative Biology 2014-04-30 Bryan C. Daniels , Ilya Nemenman

Network inference, the task of reconstructing interactions in a complex system from experimental observables, is a central yet extremely challenging problem in systems biology. While much progress has been made in the last two decades,…

Quantitative Methods · Quantitative Biology 2024-09-12 Stephen Y Zhang

A model is proposed that considers aging and rejuvenation in a soft glassy material as respectively a decrease and an increase in free energy. The aging term is weighted by inverse of characteristic relaxation time suggesting greater…

Soft Condensed Matter · Physics 2015-02-25 Yogesh M. Joshi

Magnetizations are introduced to the Generalized Random Energy Model (GREM) and numerical simulations on ac susceptibility is made for direct comparison with experiments in glassy materials. Prominent dynamical natures of spin glasses, {\it…

Disordered Systems and Neural Networks · Physics 2009-10-31 Munetaka Sasaki , Koji Nemoto

Many biological systems dynamically rearrange their components through a sequence of configurations in order to perform their functions. Such dynamic processes have been studied using network models that sequentially retrieve a set of…

Statistical Mechanics · Physics 2022-12-01 Lukas Herron , Pablo Sartori , BingKan Xue

This paper investigates the effects of vaccination on the dynamics of infectious disease, which is spreading in a population concurrently with awareness. The model considers contributions to the overall awareness from a global information…

Quantitative Methods · Quantitative Biology 2018-05-14 G. O. Agaba , Y. N. Kyrychko , K. B. Blyuss

Natural Immune system plays a vital role in the survival of the all living being. It provides a mechanism to defend itself from external predates making it consistent systems, capable of adapting itself for survival incase of changes. The…

Artificial Intelligence · Computer Science 2011-03-11 Tejbanta Singh Chingtham , G. Sahoo , M. K. Ghose

We present an exhaustive mathematical analysis of the recently proposed Non-Poissonian Ac- tivity Driven (NoPAD) model [Moinet et al. Phys. Rev. Lett., 114 (2015)], a temporal network model incorporating the empirically observed bursty…

Disordered Systems and Neural Networks · Physics 2016-09-21 Antoine Moinet , Michele Starnini , Romualdo Pastor-Satorras

Complex systems are characterized by many interacting units that give rise to emergent behavior. A particularly advantageous way to study these systems is through the analysis of the networks that encode the interactions among the system's…

Physics and Society · Physics 2019-03-21 Alberto Aleta , Yamir Moreno

We introduce a simple two-dimensional spin model with short-range interactions which shows glassy behavior despite a Hamiltonian which is completely homogeneous and possesses no randomness. We solve exactly for both the static partition…

Statistical Mechanics · Physics 2009-10-30 M. E. J. Newman , Cristopher Moore

We use coherent X-rays to probe the aging dynamics of a metallic glass directly on the atomic level. Contrary to the common assumption of a steady slowing down of the dynamics usually observed in macroscopic studies, we show that the…

Materials Science · Physics 2015-10-23 Zach Evenson , Beatrice Ruta , Simon Hechler , Moritz Stolpe , Eloi Pineda , Isabella Gallino , Ralf Busch

Under rapid undercooling, glass forming liquids freeze in an amorphous state that can equilibrate only on enormously long time-scales, This is the characteristic sign of aging, which has been observed in a wide range of systems. Brownian…

Statistical Mechanics · Physics 2023-03-01 Karina I Mazzitello , Daniel G Zarlenga , Fereydoon Family , Constancio M Arizmendi

Activity-mediated unjamming of a confluent glassy system is crucial for several biological processes, such as embryogenesis and cancer metastasis. During these processes, the cells progressively change their junction properties,…

Soft Condensed Matter · Physics 2025-05-13 Souvik Sadhukhan , Chandan Dasgupta , Saroj Kumar Nandi

Trap models have been initially proposed as toy models for dynamical relaxation in extremely simplified rough potential energy landscapes. Their importance has considerably grown recently thanks to the discovery that the trap like aging…

Disordered Systems and Neural Networks · Physics 2018-04-18 Chiara Cammarota , Enzo Marinari

We present a modeling framework for dynamical and bursty contact networks made of agents in social interaction. We consider agents' behavior at short time scales, in which the contact network is formed by disconnected cliques of different…

Physics and Society · Physics 2010-03-09 Juliette Stehle , Alain Barrat , Ginestra Bianconi

We introduce a set of theoretical ideas that form the basis for an analytical framework capable of describing nonequilibrium dynamics in glassy systems. We test the resulting scenario by comparing its predictions with numerical simulations…

Statistical Mechanics · Physics 2009-11-07 Horacio E. Castillo , Claudio Chamon , Leticia F. Cugliandolo , Malcolm P. Kennett

Co-evolutionary adaptive mechanisms are not only ubiquitous in nature, but also beneficial for the functioning of a variety of systems. We here consider an adaptive network of oscillators with a stochastic, fitness-based, rule of…

Physics and Society · Physics 2016-06-08 Young-Ho Eom , Stefano Boccaletti , Guido Caldarelli

We are interested in the out of equilibrium phenomena observed in the electrical conductance of disordered insulators at low temperature, which may be signatures of the electron coulomb glass state. The present work is devoted to the…

Disordered Systems and Neural Networks · Physics 2010-08-09 Thierry Grenet , Julien Delahaye

The spin glasses are disordered and frustrated magnetic systems. They show aging phenomena which are also a characteristic feature of structural glasses, polymers, dielectrics, colloids, etc. Under a strong enough magnetic field variation,…

Disordered Systems and Neural Networks · Physics 2007-05-23 V. Dupuis , E. Vincent , F. Bert , D. Herisson , J. Hammann , M. Ocio