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This fluid dynamics video presents three-dimensional kinetic simulations of the dynamics in suspensions of oxytactic bacteria confined in thin liquid film surrounded by air. At the initial time, the bacterial concentration is uniform and…

Fluid Dynamics · Physics 2011-10-17 Barath Ezhilan , Amir Alizadeh Pahlavan , David Saintillan

Using molecular dynamics computer simulations we investigate the structural and dynamical properties of a simple model for a colloidal gel at low volume fraction. We find that at low T the system is forming an open percolating cluster,…

Disordered Systems and Neural Networks · Physics 2015-06-25 Emanuela Del Gado , Walter Kob

We present computer simulations of liquid and solid phases of condensed methane at pressures below 25 GPa, between 150 and 300 K, where no appreciable molecular dissociation occurs. We used molecular dynamics (MD) and metadynamics…

Materials Science · Physics 2015-05-13 Leonardo Spanu , Davide Donadio , Detlef Hohl , Giulia Galli

We simulate the liquid silicon surface with first-principles molecular dynamics in a slab geometry. We find that the atom-density profile presents a pronounced layering, similar to those observed in low-temperature liquid metals like Ga and…

Soft Condensed Matter · Physics 2009-10-31 G. Fabricius , E. Artacho , D. Sanchez-Portal , P. Ordejon , D. A. Drabold , J. M. Soler

We present a single, unified, multi-scale model to study the attachment\detachment dynamics of two deforming, near spherical cells, coated with binding ligands and subject to a slow, homogeneous shear flow in a viscous fluid medium. The…

Cell Behavior · Quantitative Biology 2015-04-23 Sarthok Sircar , Anthony J. Roberts

The electronic structure and chemical bonding of wurtzite-GaN investigated by N 1s soft x-ray absorption spectroscopy and N K, Ga M1, and Ga M2,3 emission spectroscopy is compared to that of pure Ga. The measurements are interpreted by…

Materials Science · Physics 2011-12-30 Martin Magnuson , Maurizio Mattesini , Carina Höglund , Jens Birch , Lars Hultman

The complete quantitative description of the structure of dense and supercooled liquids remains a notoriously difficult problem in statistical physics. Most studies to date focus solely on two-body structural correlations, and only a…

Statistical Mechanics · Physics 2023-05-17 Ilian Pihlajamaa , Corentin C. L. Laudicina , Chengjie Luo , Liesbeth M. C. Janssen

We study the dynamics of water confined between hydrophobic flat surfaces at low temperature. At different pressures, we observe different behaviors that we understand in terms of the hydrogen bonds dynamics. At high pressure, the formation…

Soft Condensed Matter · Physics 2015-05-13 Giancarlo Franzese , Francisco de los Santos

Structure and dynamics of water remain a challenge. Resolving the properties of hydrogen bonding lies at the heart of this puzzle. Here we employ ab initio Molecular Dynamics (AIMD) simulations over a wide temperature range. The total…

Soft Condensed Matter · Physics 2013-04-04 John Tatini Titantah , Mikko Karttunen

Elastic properties and internal states of isotropic sphere packings are studied by numerical simulations. Several numerical protocols to assemble dense configurations are compared. One, which imitates experiments with lubricated contacts,…

Materials Science · Physics 2009-01-16 Ivana Agnolin , Jean-Noël Roux

We develop an atomistic, nearest-neighbor sp3s* tight-binding Hamiltonian to investigate the electronic structure of dilute bismide alloys of GaP and GaAs. Using this model we calculate that the incorporation of dilute concentrations of Bi…

Materials Science · Physics 2011-12-12 Muhammad Usman , Christopher A. Broderick , Andrew Lindsay , Eoin P. O'Reilly

We experimentally investigate the rheology and stress fluctuations of granules densely suspended in silicone oil. We find that both thickening strength and stress fluctuations significantly weaken with oil viscosity $\eta_0$. Comparison of…

Soft Condensed Matter · Physics 2020-04-22 Qin Xu , Abhinendra Singh , Heinrich M. Jaeger

Via simulations of flowing foam, we connect the high and intermediate density regimes of complex fluid flows into a consistent microscopic picture of deformation. While at and above the jamming transition, elastic correlations lead to…

Soft Condensed Matter · Physics 2015-12-09 V. Chikkadi , E. Woldhuis , M. van Hecke , P. Schall

According to the theoretical predictions, insulating molecular hydrogen dissociates and transforms to an atomic metal at pressures P~370-500 GPa. In another scenario, the metallization first occurs in the 250-500 GPa pressure range in…

Materials Science · Physics 2019-06-18 M. I. Eremets , A. P. Drozdov , P. P. Kong , H. Wang

In most of the realistic ab initio and model calculations which have appeared on the emission of light from Si nanocrystals, the role of surface oxygen has been usually ignored, underestimated or completely ruled out. We investigate…

Mesoscale and Nanoscale Physics · Physics 2016-08-03 Shanawer Niaz , Aristides D. Zdetsis , Emmanuel N. Koukaras , Oguz Gulseren , Imran Sadiq

We present a density-functional theory based molecular-dynamics study of the structural, dynamical, and electronic properties of liquid methanol under ambient conditions. The calculated radial distribution functions involving the oxygen and…

Chemical Physics · Physics 2009-11-07 Jan-Willem Handgraaf , Titus S. van Erp , Evert Jan Meijer

The water impact of an inclined flat plate and at high horizontal velocity is experimentally investigated with focus on the fluid-structure interaction aspects. Several test conditions have been examined by varying the vertical to…

Fluid Dynamics · Physics 2021-05-17 Emanuele Spinosa , Alessandro Iafrati

Correlated oxide heterostructures pose a challenging problem in condensed matter research due to their structural complexity interweaved with demanding electron states beyond the effective single-particle picture. By exploring the…

Materials Science · Physics 2018-04-05 Frank Lechermann

Lithium - the lightest alkali metal - exhibits unexpected structures and electronic behaviour at high pressures. As the heavier alkalis, Li is bcc at ambient pressure and transforms first to fcc (at 7.5 GPa). The post-fcc high-pressure form…

Materials Science · Physics 2016-12-21 Valentina Degtyareva

Multiphase shear flows often show banded structures that affect the global behavior of complex fluids e.g. in microdevices. Here we investigate numerically the banding of emulsions, i.e. the formation of regions of high and low volume…

Fluid Dynamics · Physics 2020-04-30 Francesco De Vita , Marco Edoardo Rosti , Sergio Caserta , Luca Brandt
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