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We investigate a system of dense polyelectrolytes in solution. The Langevin dynamics of the system with linearized hydrodynamics is formulated in the functional integral formalism and a transformation made to collective coordinates. Within…

Soft Condensed Matter · Physics 2015-06-25 Kristian K. M"uller-Nedebock , Thomas A. Vilgis

We present results from extensive molecular dynamics simulations of collapse transitions of hydrophobic polymers in explicit water focused on understanding effects of lengthscale of the hydrophobic surface and of attractive interactions on…

Statistical Mechanics · Physics 2007-05-23 Manoj V. Athawale , Gaurav Goel , Tuhin Ghosh , Thomas M. Truskett , Shekhar Garde

Within the Poisson-Boltzmann (PB) approach electrolytes in contact with planar, spherical, and cylindrical electrodes are analyzed systematically. The dependences of their capacitance $C$ on the surface charge density $\sigma$ and the ionic…

Soft Condensed Matter · Physics 2017-04-24 Andreas Reindl , Markus Bier , S. Dietrich

Understanding about both the range and the strength of the effective force between two hydrophobic surfaces suspended in water is important in many areas of natural science but unfortunately has remained imperfect. Even the experimental…

Chemical Physics · Physics 2016-08-23 Tuhin Samanta , Saikat Banerjee , Biman Bagchi

The scaling of the bond-bond correlation function $C(s)$ along linear polymer chains is investigated with respect to the curvilinear distance, $s$, along the flexible chain and the monomer density, $\rho$, via Monte Carlo and molecular…

Soft Condensed Matter · Physics 2009-11-10 J. P. Wittmer , H. Meyer , J. Baschnagel , A. Johner , S. Obukhov , L. Mattioni , M. Mueller , A. N. Semenov

In this work we investigated the question of how the molecular nature of the dielectric media and the polymer-solvent dielectric mismatch affect the collapse of a polyelectrolyte chain in solution by means of dissipative particle dynamics…

Soft Condensed Matter · Physics 2021-12-15 Yulia D. Gordievskaya , Elena Yu. Kramarenko , Alexey A. Gavrilov

Angular correlations in dense solutions and melts of flexible polymer chains are investigated with respect to the distance $r$ between the bonds by comparing quantitative predictions of perturbation calculations with numerical data obtained…

Soft Condensed Matter · Physics 2015-05-14 J. P. Wittmer , A. Johner , S. P. Obukhov , H. Meyer , A. Cavallo , J. Baschnagel

In a recent work we proposed a coarse-grained methodology for studying the response of peptides when simulated at different values of pH; in this work we extend the methodology to analyze the pH-dependent behavior of coiled coils. This…

Biological Physics · Physics 2013-08-26 Marta Enciso , Christof Schuette , Luigi Delle Site

We compute the phase diagram of salt-free polyelectrolyte solutions using a modified Debye-Huckel Approach. We introduce the chain connectivity via the Random Phase Approximation with two important modifications. We modify the electrostatic…

Condensed Matter · Physics 2009-11-07 A. V. Ermoshkin , M. Olvera de la Cruz

Small angle X-ray scattering (SAXS) studies in poly[2-methoxy-5-(2'-ethyl-hexyloxy)-1,4-phenylene vinylene] (MEH-PPV) with varying conjugation, and polyethylene dioxythiophene complexed with polystyrene sulfonate (PEDOT-PSS) in different…

Soft Condensed Matter · Physics 2010-11-11 Paramita Kar Choudhury , Debjani Bagchi , C. S. Suchand Sangeeth , Reghu Menon

The hydrophobic/polar HP model on the square lattice has been widely used to investigate basics of protein folding. In the cases where all designing sequences (sequences with unique ground states) were enumerated without restrictions on the…

Soft Condensed Matter · Physics 2007-05-23 Anders Irbäck , Carl Troein

We report molecular dynamics simulations of a hydrophobic polymer-chain in aqueous solution between $260 {K}$ and $420 {K}$ at pressures of $1 {bar}$, $3000 {bar}$, and $4500 {bar}$. The simulations reveal a hydrophobically collapsed state…

Soft Condensed Matter · Physics 2017-09-13 Dietmar Paschek , Sascha Nonn , Alfons Geiger

We study the bending rigidity of highly charged stiff polyelectrolytes, for both a single chain and many chains forming a bundle. A theory is developed to account for the interplay between competitive binding of counterions and charge…

Soft Condensed Matter · Physics 2009-11-07 Bae-Yeun Ha , D. Thirumalai

In this paper, we study electrostatic and structural properties between pH-responsive polyelectrolyte brushes by using a strong stretching theory accounting for excluded volume interactions, the density of polyelectrolyte chargeable sites…

Soft Condensed Matter · Physics 2022-08-31 Jun-Sik Sin

Complexation in symmetric solutions of oppositely charged polyelectrolytes is studied theoretically. We include polyion crosslinking due to formation of thermoreversible ionic pairs. The electrostatic free energy is calculated within the…

Soft Condensed Matter · Physics 2009-11-10 Alexander Kudlay , Alexander V. Ermoshkin , Monica Olvera de la Cruz

Binding and phase behavior of oppositely charged polyelectrolytes and surfactants were studied in aqueous bulk solutions and at air-water interfaces. In particular, we have investigated the polyanion poly(sodium 4-styrenesulfonate) (NaPSS)…

Soft Condensed Matter · Physics 2020-07-16 Felix Schulze-Zachau , Björn Braunschweig

Based on our recent study on physical origin of hydrophobic effects, this is applied to investigate the dependence of hydrophobic interactions on the solute size. As two same hydrophobic solutes are dissolved into water, the hydration free…

Soft Condensed Matter · Physics 2018-03-07 Qiang Sun

We apply extensive Molecular Dynamics simulations and analytical considerations in order to study the conformations and the effective interactions between weakly charged, flexible polyelectrolyte chains in salt-free conditions. We focus on…

Soft Condensed Matter · Physics 2009-11-10 Martin Konieczny , Christos N. Likos , Hartmut Löwen

Structural and thermodynamic properties of the model solution containing charged oligomers and the equivalent number of counterions were studied by means of the canonical Monte Carlo simulation technique. The oligomers are represented as…

Soft Condensed Matter · Physics 2012-02-21 T. Sajevic , J. Rescic , V. Vlachy

This chapter deals with charged polymers (polyelectrolytes) in solution and at surfaces. The behavior of polyelectrolytes is markedly different from that of neutral polymers. In bulk solutions, i.e. disregarding the surface effect, there…

Soft Condensed Matter · Physics 2009-09-25 Roland R. Netz , David Andelman