Related papers: Simulation software for 'Simulating Dynamical Feat…
Two important enhanced sampling algorithms, simulated (ST) and parallel (PT) tempering, are commonly used when ergodic simulations may be hard to achieve, e.g, due to a phase space separated by large free-energy barriers. This is so for…
The roundworm C. elegans exhibits robust escape behavior in response to rapidly rising temperature. The behavior lasts for a few seconds, shows history dependence, involves both sensory and motor systems, and is too complicated to model…
Replicating existing agent-based models poses significant challenges, particularly for those new to the field. This article presents an all-encompassing guide to re-implementing agent-based models, encompassing vital concepts such as…
We present TDS Simulator, a new software tool aimed at modelling thermal desorption spectroscopy (TDS) experiments. TDS is a widely used technique for quantifying key characteristics of hydrogen-material interactions, such as diffusivity…
This paper presents a new experiment design method for data-driven modeling and control. The idea is to select inputs online (using past input/output data), leading to desirable rank properties of data Hankel matrices. In comparison to the…
As insufficient data volume and quality remain the key impediments to the adoption of modern subsymbolic AI, techniques of synthetic data generation are in high demand. Simulation offers an apt, systematic approach to generating diverse…
This is the documentation for Spatio-TEmporal Motor-POwered (STEMPO) phantom for dynamic X-ray tomography. Provided are different measurements designed for testing dynamic tomography reconstruction algorithms. The measured data and…
The traditional sauna is studied from a thermal and fluid dynamics standpoint using the NIST's Fire Dynamics Simulator (FDS) software. Calculations are performed in order to determine temperature and velocity fields, heat flux, soot and…
In a recent preprint [1] (arXiv:2503.05693), Tindall et al. presented impressive classical simulations of quantum dynamics using tensor networks. Their methods represent a significant improvement in the classical state of the art, and in…
The digital educational solutions are increasingly used demanding high quality functionalities. In this sense, standards and models are made available by governments, associations, and researchers being most used in quality control and…
In order to describe or estimate different quantities related to a specific random variable, it is of prime interest to numerically generate such a variate. In specific situations, the exact generation of random variables might be either…
Simulating physical systems is a core component of scientific computing, encompassing a wide range of physical domains and applications. Recently, there has been a surge in data-driven methods to complement traditional numerical simulations…
This is the documentation for dynamic X-ray tomography measurements of a gel phantom diffused with potassium iodide contrast agent. The measured data and additional materials are available at http://www.fips.fi/dataset.php and Zenodo…
We extended our simulation tool Ntccrt for probabilistic ntcc (pntcc) models. In addition, we developed a verification tool for pntcc models. Using this tool we can prove properties such as the system will go to a successful state with…
In this paper we propose an approach to build a decision support system that can help emergency planners and responders to detect and manage emergency situations. The internal mechanism of the system is independent from the treated…
We survey an area of recent development, relating dynamics to theoretical computer science. We discuss the theoretical limits of simulation and computation of interesting quantities in dynamical systems. We will focus on central objects of…
This text is a slightly edited version of lecture notes for a course I gave at ETH, during the Winter term 2000-2001, to undergraduate Mathematics and Physics students. Contents: Chapter 1 - Examples of Dynamical Systems Chapter 2 -…
We consider adapting a canonical computer model calibration apparatus, involving coupled Gaussian process (GP) emulators, to a computer experiment simulating radiative shock hydrodynamics that is orders of magnitude larger than what can…
We examine a variety of numerical methods that arise when considering dynamical systems in the context of physics-based simulations of deformable objects. Such problems arise in various applications, including animation, robotics, control…
In this paper we describe a method for modeling the dynamic behavior of splashing fluids. The model simulates the behavior of a fluid when objects impact or float on its surface. The forces generated by the objects create waves and splashes…