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The freely rotating chain is one of the classic discrete models of a polymer in dilute solution. It consists of a broken line of N straight segments of fixed length such that the angle between adjacent segments is constant and the N-1…

Probability · Mathematics 2017-11-15 Philip Kilanowski , Peter March , Marko Samara

The dynamics of flexible polymer molecules are often assumed to be governed by hydrodynamics of the solvent. However there is considerable evidence that internal dissipation of a polymer contributes as well. Here we investigate the dynamics…

Soft Condensed Matter · Physics 2013-05-29 J. M. Deutsch

We give a lower bound on the diffusion coefficient of a polymer chain in an entanglement network with kinematic disorder, which is obtained from an exact calculation in a modified Rubinstein-Duke lattice gas model with periodic boundary…

Soft Condensed Matter · Physics 2009-11-07 Richard D. Willmann

We present results on the ballistic and diffusive behavior of the Langevin dynamics in a periodic potential that is driven away from equilibrium by a space-time periodic driving force, extending some of the results obtained by Collet and…

Mathematical Physics · Physics 2015-06-19 R. Joubaud , G. Pavliotis , G. Stoltz

We study the quench dynamics of a two dimensional superconductor in a lattice of size up to $200\times 200$ employing the self-consistent time dependent Bogoliubov-de Gennes (BdG) formalism. In the clean limit, the dynamics of the order…

Superconductivity · Physics 2024-08-14 Bo Fan , Antonio M. García-García

We present a new time-dependent Density Functional approach to study the relaxational dynamics of an assembly of interacting particles subject to thermal noise. Starting from the Langevin stochastic equations of motion for the velocities of…

Statistical Mechanics · Physics 2016-08-31 Umberto Marini Bettolo Marconi , Pedro Tarazona

We constrast the dynamics in model unentangled polymer melts of chains of three different stiffnesses: flexible, intermediate, and rodlike. Flexible and rodlike chains, which readily solidify into close-packed crystals (respectively with…

Soft Condensed Matter · Physics 2016-11-23 Hong T. Nguyen , Robert S. Hoy

We used a coarse-grained model to study the geometric and dynamic properties of flexible entangled polymer chains dissolved in explicit athermal solvents. Our simulations successfully reproduced the geometrical properties including the…

Soft Condensed Matter · Physics 2023-06-16 Jiayi Wang , Ping Gao

Linear polymers are represented as chains of hopping reptons and their motion is described as a stochastic process on a lattice. This admittedly crude approximation still catches essential physics of polymer motion, i.e. the universal…

Statistical Mechanics · Physics 2015-05-18 J. M. J. van Leeuwen , Andrzej Drzewinski

The endpoint distribution and dynamics of semiflexible fibers is studied by numerical simulation. A brief overview is given over the analytical theory of flexible and semiflexible polymers. In particular, a closed expression is given for…

Soft Condensed Matter · Physics 2013-06-13 Robert D. Groot

The interplay of disorder and interactions is a subject of perennial interest. In this work, we have investigated the effect of disorder due to chemical substitution on the dynamics and transport properties of correlated Fermi liquids. A…

Strongly Correlated Electrons · Physics 2014-03-07 N. S. Vidhyadhiraja , Pramod Kumar

We investigate the time evolution of the heteropolymer model introduced by Iori, Marinari and Parisi to describe some of the features of protein folding mechanisms. We study how the (folded) shape of the chain evolves in time. We find that…

High Energy Physics - Lattice · Physics 2009-10-22 Pawel Pliszka , Enzo Marinari

Materials failure in 3D still poses basic challenges. We study 3D brittle crack dynamics using a phase-field approach, where Gaussian quenched disorder in the fracture energy is incorporated. Disorder is characterized by a correlation…

Materials Science · Physics 2024-09-02 Yuri Lubomirsky , Eran Bouchbinder

The behavior of coupled disordered one-dimensional systems, as modelled by identical fermionic Hubbard chains with the on-site potential disorder and coupling emerging through the inter-chain hopping $t'$, is analysed. The study is…

Disordered Systems and Neural Networks · Physics 2016-10-12 Peter Prelovšek

Using Langevin dynamics complemented by Wang-Landau Monte Carlo simulations, we study the phase behavior of single and multiple semiflexible polymer chains in solution under poor-solvent conditions. In the case of a single chain, we obtain…

Loops undergoing thermal fluctuations are prevalent in nature. Ring-like or cross-linked polymers, cyclic macromolecules, and protein-mediated DNA loops all belong to this category. Stability of these molecules are generally described in…

Computational Physics · Physics 2016-04-27 James T. Waters , Harold D. Kim

Bead spring models for polymers in solution are nonlinear if either the finite extensibility of the polymer, excluded volume effects or hydrodynamic interactions between polymer segments are taken into account. For such models we use a…

Soft Condensed Matter · Physics 2009-11-07 Roland Rzehak , Walter Zimmermann

Entanglement plays a prominent role in the study of condensed matter many-body systems: Entanglement measures not only quantify the possible use of these systems in quantum information protocols, but also shed light on their physics.…

Quantum Physics · Physics 2021-11-02 Shachar Fraenkel , Moshe Goldstein

Motivated by single molecule experiments on biopolymers we explore equilibrium morphologies and force-extension behavior of copolymers with hydrophobic segments using Langevin dynamics simulations. We find that the interplay between…

Soft Condensed Matter · Physics 2013-10-15 Ankur Mishra , Ajay S. Panwar , Buddhapriya Chakrabarti

Polydispersity is inevitable in industrially produced polymers. Established theories of polymer dynamics and rheology, however, were mostly built on monodisperse linear polymers. Dynamics of polydisperse polymers is yet to be fully explored…

Soft Condensed Matter · Physics 2021-06-29 Oluseye Adeyemi , Shiping Zhu , Li Xi