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Complex spatial patterns in biological systems often arise through self-organization without a central coordination, guided by local interactions and chemical signaling. In this study, we explore how motility-dependent chemical deposition…

Biological Physics · Physics 2025-04-24 Subhashree Subhrasmita Khuntia , Debasish Chaudhuri , Abhishek Chaudhuri

We consider an unsupervised classifying agent that evolves by enforcing self-consistency of its labels under continual exposure to a data-generating environment. Because the agent's predictions feed back into its own regularized updates,…

Disordered Systems and Neural Networks · Physics 2025-09-30 Sebastiano Ariosto , Jerome Garnier-Brun , Luca Saglietti , Davide Straziota

We present a modeling framework for dynamical and bursty contact networks made of agents in social interaction. We consider agents' behavior at short time scales, in which the contact network is formed by disconnected cliques of different…

Physics and Society · Physics 2010-03-09 Juliette Stehle , Alain Barrat , Ginestra Bianconi

We introduce a simple network formation model for social networks. Agents are nodes, connecting to another agent by building a directed edge (or accepting a connection from another agent) has a cost, and reaching (or being reached by) other…

Social and Information Networks · Computer Science 2016-04-22 L. Elisa Celis , Aida Sadat Mousavifar

Graph Neural Networks (GNNs) have achieved remarkable success in graph-based learning by propagating information among neighbor nodes via predefined aggregation mechanisms. However, such fixed schemes often suffer from two key limitations.…

Computation and Language · Computer Science 2025-10-21 Minghao Guo , Xi Zhu , Haochen Xue , Chong Zhang , Shuhang Lin , Jingyuan Huang , Ziyi Ye , Yongfeng Zhang

A self-organization of efficient and robust networks is important for a future design of communication or transportation systems, however both characteristics are incompatible in many real networks. Recently, it has been found that the…

Physics and Society · Physics 2015-08-12 Yukio Hayashi

After summarizing basic features of self-organization such as entropy export, feedbacks and nonlinear dynamics, we discuss several examples in biology. The main part of the paper is devoted to a model of active Brownian motion that allows a…

Statistical Mechanics · Physics 2007-05-23 Werner Ebeling , Frank Schweitzer

Communities are an important feature of social networks. The goal of this paper is to propose a mathematical model to study the community structure in social networks. For this, we consider a particular case of a social network, namely…

Social and Information Networks · Computer Science 2020-04-14 Peter Marbach

The use of methods borrowed from statistics and physics to analyze written texts has allowed the discovery of unprecedent patterns of human behavior and cognition by establishing links between models features and language structure. While…

Computation and Language · Computer Science 2016-07-07 Diego R. Amancio

Modern socio-economic systems are undergoing deep integration with artificial intelligence technologies. This paper constructs a heterogeneous agent-based modeling framework that incorporates both human workers and autonomous AI agents, to…

Artificial Intelligence · Computer Science 2025-09-30 Yuxinyue Qian , Jun Liu

Humans possess the capability to reason at an abstract level and to structure information into abstract categories, but the underlying neural processes have remained unknown. Experimental evidence has recently emerged for the organization…

Neurons and Cognition · Quantitative Biology 2022-04-05 Michael G. Müller , Christos H. Papadimitriou , Wolfgang Maass , Robert Legenstein

We study a material modeled as a network of nodes connected by edges. Using a discrete approach, we build a nonlinear algebraic system that connects applied forces to internal forces and node positions. The model can describe elasticity,…

Optimization and Control · Mathematics 2025-10-14 Ioannis Dassios

Evolution produces complex and structured networks of interacting components in chemical, biological, and social systems. We describe a simple mathematical model for the evolution of an idealized chemical system to study how a network of…

Adaptation and Self-Organizing Systems · Physics 2014-03-05 Sanjay Jain , Sandeep Krishna

In many problems, agents cooperate locally so that a leader or fusion center can infer the state of every agent from probing the state of only a small number of agents. Versions of this problem arise when a fusion center reconstructs an…

Multiagent Systems · Computer Science 2017-02-10 Stephen Kruzick , Sérgio Pequito , Soummya Kar , José M. F. Moura , A. Pedro Aguiar

Most of the grand challenges of humanity today involve complex agent-based systems, such as epidemiology, economics or ecology. However, remains as a pending task the challenge of identifying the general principles underlying their…

General Finance · Quantitative Finance 2020-10-19 Martin Jaraiz

Agent-based modeling and simulation tools provide a mature platform for development of complex simulations. They however, have not been applied much in the domain of mainstream modeling and simulation of computer networks. In this article,…

Networking and Internet Architecture · Computer Science 2017-08-07 Muaz A. Niazi , Amir Hussain

Despite the large quantity of information available, thorough researches in various biological databases are still needed in order to reconstruct and understand the steps that lead to known or new phenomena. By using protein-protein…

Molecular Networks · Quantitative Biology 2014-12-03 Alberto Calderone

Networks such as organizational network of a global company play an important role in a variety of knowledge management and information diffusion tasks. The nodes in these networks correspond to individuals who are self-interested. The…

Computer Science and Game Theory · Computer Science 2014-10-10 Swapnil Dhamal , Y. Narahari

The chapter describes the modeling of a material handling system with the production of individual units in a scheduled order. The units represent the agents in the model and are transported in the system which is abstracted as a directed…

Physics and Society · Physics 2010-12-22 Thomas Seidel , Jeanette Hartwig , Richard L. Sanders , Dirk Helbing

We study a biologically motivated model of overdamped, autochemotactic Brownian agents with concentration-dependent chemotactic sensitivity. The agents in our model move stochastically and produce a chemical ligand at their current…

Statistical Mechanics · Physics 2015-06-17 Marcel Meyer , Lutz Schimansky-Geier , Pawel Romanczuk