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Eisen is an open source python package making the implementation of deep learning methods easy. It is specifically tailored to medical image analysis and computer vision tasks, but its flexibility allows extension to any application. Eisen…

Computer Vision and Pattern Recognition · Computer Science 2020-04-07 Frank Mancolo

To enhance the reliability and credibility of graph neural networks (GNNs) and improve the transparency of their decision logic, a new field of explainability of GNNs (XGNN) has emerged. However, two major limitations severely degrade the…

Machine Learning · Computer Science 2025-05-26 Han Zhang , Yan Wang , Guanfeng Liu , Pengfei Ding , Huaxiong Wang , Kwok-Yan Lam

The oxDNA model of DNA has been applied widely to systems in biology, biophysics and nanotechnology. It is currently available via two independent open source packages. Here we present a set of clearly-documented exemplar simulations that…

Biomolecules · Quantitative Biology 2022-09-26 Aditya Sengar , Thomas E. Ouldridge , Oliver Henrich , Lorenzo Rovigatti , Petr Sulc

Pulsed beams have tremendous advantages for precision experiments with cold neutrons. In order to minimise and measure systematic effects, they are used at continuous sources in spite of the related substantial decrease in intensity. At the…

Despite the promising future of autonomous robots, several key issues currently remain that can lead to compromised performance and safety. One such issue is latency, where we find that even the latest embedded platforms from NVIDIA fail to…

Robotics · Computer Science 2024-08-13 Zexin Li , Soroush Bateni , Cong Liu

As vulnerability research increasingly adopts generative AI, a critical reliance on opaque model outputs has emerged, creating a "trust gap" in security automation. We address this by introducing Zer0n, a framework that anchors the…

Cryptography and Security · Computer Science 2026-01-13 Harshil Parmar , Pushti Vyas , Prayers Khristi , Priyank Panchal

A new experimental area, the NEAR station, has recently been built at the CERN n TOF facility, at a short distance from the spallation target (1.5 m). The new area, characterized by a neutron beam of very high flux, has been designed with…

Instrumentation and Detectors · Physics 2022-09-13 N. Patronis , A. Mengoni , N. Colonna , M. Cecchetto , C. Domingo-Pardo , O. Aberle , J. Lerendegui-Marco , G. Gervino , M. E. Stamati , S. Goula , A. P. Bernardes , M. Mastromarco , A. Manna , R. Vlastou , C. Massimi , M. Calviani , V. Alcayne , S. Altieri , S. Amaducci , J. Andrzejewski , V. Babiano-Suarez , M. Bacak , J. Balibrea , C. Beltrami , S. Bennett , E. Berthoumieux , M. Boromiza , D. Bosnar , M. Caamano , F. Calvino , D. Cano-Ott , A. Casanovas , F. Cerutti , G. Cescutti , S. Chasapoglou , E. Chiaveri , P. Colombetti , P. Console Camprini , G. Cortes , M. A. Cortes-Giraldo , L. Cosentino , S. Cristallo , S. Dellmann , M. Di Castro , S. Di Maria , M. Diakaki , M. Dietz , R. Dressler , E. Dupont , I. Duran , Z. Eleme , S. Fargier , B. Fernandez , B. Fernandez-Dominguez , P. Finocchiaro , S. Fiore , V. Furman , F. Garcia-Infantes , A. Gawlik-Ramiega , S. Gilardoni , E. Gonzalez-Romero , C. Guerrero , F. Gunsing , C. Gustavino , J. Heyse , W. Hillman , D. G. Jenkins , E. Jericha , A. Junghans , Y. Kadi , K. Kaperoni , G. Kaur , A. Kimura , I. Knapova , M. Kokkoris , Y. Kopatch , M. Krticka , N. Kyritsis , I. Ladarescu , C. Lederer-Woods , G. Lerner , T. Martınez , A. Masi , P. Mastinu , E. A. Maugeri , A. Mazzone , E. Mendoza , P. M. Milazzo , R. Mucciola , F. Murtas , E. Musacchio-Gonzalez , A. Musumarra , A. Negret , A. Perez de Rada , P. Perez-Maroto , J. A. Pavon-Rodrıguez , M. G. Pellegriti , J. Perkowski , C. Petrone , E. Pirovano , J. Plaza , S. Pomp , I. Porras , J. Praena , J. M. Quesada , R. Reifarth , D. Rochman , Y. Romanets , C. Rubbia , A. Sanchez , M. Sabate-Gilarte , P. Schillebeeckx , D. Schumann , A. Sekhar , A. G. Smith , N. V. Sosnin , A. Sturniolo , G. Tagliente , D. Tarrio , P. Torres-Sanchez , S. Urlass , E. Vagena , S. Valenta , V. Variale , P. Vaz , G. Vecchio , D. Vescovi , V. Vlachoudis , T. Wallner , P. J. Woods , T. Wright , R. Zarrella , P. Zugec

Graph Neural Networks (GNNs) have recently shown to be powerful tools for representing and analyzing graph data. So far GNNs is becoming an increasingly critical role in software engineering including program analysis, type inference, and…

Artificial Intelligence · Computer Science 2021-02-17 Jintang Li , Kun Xu , Liang Chen , Zibin Zheng , Xiao Liu

Extracting accurate results from neutrino oscillation and cross section experiments requires accurate simulation of the neutrino-nucleus interaction. The rescattering of outgoing hadrons (final state interactions) by the rest of the nucleus…

High Energy Physics - Experiment · Physics 2025-08-05 S. Dytman , M. Betancourt , N. Steinberg , L. B. Weinstein , A. Ashkenazi , J. Tena-Vidal , A. Papadopoulou , G. Chambers-Wall , J. Smith , P. Achenbach , J. S. Alvarado , M. J. Amaryan , H. Atac , L. Baashen , N. A. Baltzell , L. Barion , M. Bashkanov , M. Battaglieri , F. Benmokhtar , A. Bianconi , A. S. Biselli , M. Bondi , F. Bossu , S. Boiarinov , K. -Th. Brinkmann , W. J. Briscoe , W. K. Brooks , S. Bueltmann , V. D. Burkert , T. Cao , R. Capobianco , D. S. Carman , J. C. Carvajal , P. Chatagnon , V. Chesnokov , H. Chinchay , G. Ciullo , P. L. Cole , M. Contalbrigo , A. DAngelo , N. Dashyan , R. De Vita , M. Defurne , A. Deur , S. Diehl , C. Djalali , R. Dupre , H. Egiyan , A. El Alaoui , L. El Fassi , L. Elouadrhiri , M. Farooq , S. Fegan , I. P. Fernando , A. Filippi , G. Gavalian , G. P. Gilfoyle , R. W. Gothe , L. Guo , K. Hafidi , H. Hakobyan , M. Hattawy , F. Hauenstein , T. B. Hayward , D. Heddle , A. Hobart , M. Holtrop , Yu-Chun Hung , Y. Ilieva , D. G. Ireland , E. L. Isupov , H. Jiang , H. S. Jo , S. Joosten , M. Khandaker , A. Kim , W. Kim , F. J. Klein , V. Klimenko , A. Kripko , V. Kubarovsky , S. E. Kuhn , L. Lanza , P. Lenisa , D. Marchand , V. Mascagna , D. Matamoros , B. McKinnon , T. Mineeva , M. Mirazita , V. Mokeev , C. Munoz Camacho , P. Nadel-Turonski , T. Nagorna , K. Neupane , D. Nguyen , S. Niccolai , M. Osipenko , L. L. Pappalardo , R. Paremuzyan , E. Pasyuk , S. J. Paul , W. Phelps , N. Pilleux , S. Polcher Rafael , J. W. Price , Y. Prok , T. Reed , J. Richards , M. Ripani , J. Ritman , A. A. Rusova , S. Schadmand , A. Schmidt , R. A. Schumacher , M. B. C. Scott , Y. G. Sharabian , E. V. Shirokov , S. Shrestha , N. Sparveris , M. Spreafico , S. Stepanyan , I. Strakovsky , S. Strauch , J. A. Tan , M. Tenorio , N. Trotta , R. Tyson , M. Ungaro , D. W. Upton , S. Vallarino , L. Venturelli , T. Vittorini , H. Voskanyan , E. Voutier , Y. Wang , D. P. Watts , U. Weerasinghe , X. Wei , M. H. Wood , L. Xu , N. Zachariou

Open-weight general-purpose AI (GPAI) models offer significant benefits but also introduce substantial cybersecurity risks, as demonstrated by the offensive capabilities of models like DeepSeek-R1 in evaluations such as MITRE's OCCULT.…

Cryptography and Security · Computer Science 2025-05-26 Alfonso de Gregorio

Various studies have studied the impact of Generative AI on Computing Education. However, they have focused on the implications for novice programmers. In this experience report, we analyze the use of GenAI as a support tool for learning,…

Computers and Society · Computer Science 2025-03-21 Isaac Alpizar-Chacon , Hieke Keuning

Background: The rapid development and use of generative AI (GenAI) tools in academia presents complex and multifaceted ethical challenges for its users. Earlier research primarily focused on academic integrity concerns related to students'…

Computers and Society · Computer Science 2024-12-16 Sonja Bjelobaba , Lorna Waddington , Mike Perkins , Tomáš Foltýnek , Sabuj Bhattacharyya , Debora Weber-Wulff

Recent advances in GenAI have enabled automation in data visualization, allowing users to generate visual representations using natural language. However, existing systems primarily focus on automation, overlooking users' varying expertise…

Human-Computer Interaction · Computer Science 2025-04-10 Kathrin Schnizer , Sven Mayer

The Italian AGILE space mission, with its Gamma-Ray Imaging Detector (GRID) instrument sensitive in the 30 MeV-50 GeV gamma-ray energy band, has been operating since 2007. Agilepy is an open-source Python package to analyse AGILE/GRID data.…

Instrumentation and Methods for Astrophysics · Physics 2023-02-09 A. Bulgarelli , L. Baroncelli , A. Addis , N. Parmiggiani , A. Aboudan , A. Di Piano , V. Fioretti , M. Tavani , C. Pittori , F. Lucarelli , F. Verrecchia

Open data is an emerging paradigm to share large and diverse datasets -- primarily from governmental agencies, but also from other organizations -- with the goal to enable the exploitation of the data for societal, academic, and commercial…

Software Engineering · Computer Science 2012-02-09 Holger M. Kienle

Generative artificial intelligence (GenAI) has become a transformative approach in bioinformatics that often enables advancements in genomics, proteomics, transcriptomics, structural biology, and drug discovery. To systematically identify…

Applications of Generative AI (Gen AI) are expected to revolutionize a number of different areas, ranging from science & medicine to education. The potential for these seismic changes has triggered a lively debate about the potential risks…

Calls to use open generative language models in academic research have highlighted the need for reproducibility and transparency in scientific research. However, the impact of generative AI extends well beyond academia, as corporations and…

Human-Computer Interaction · Computer Science 2024-08-06 Robert Wolfe , Tanushree Mitra

Over the last decade, Artificial Intelligence (AI) has become increasingly popular, especially with the use of chatbots such as ChatGPT, Gemini, and DALL-E. With this rise, large language models (LLMs) and Generative AI (GenAI) have also…

Cryptography and Security · Computer Science 2024-03-20 Yagmur Yigit , William J Buchanan , Madjid G Tehrani , Leandros Maglaras

PEER-REVIEWED AND ACCEPTED IN IEEE- ISTAS 2025 The rapid evolution of Generative AI (GenAI) has introduced unprecedented opportunities while presenting complex challenges around ethics, accountability, and societal impact. This paper draws…

Computers and Society · Computer Science 2025-09-16 Dhari Gandhi , Himanshu Joshi , Lucas Hartman , Shabnam Hassani