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Related papers: Conformations of dendrimers in dilute solution

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We use monomer-resolved numerical simulations to study the positional and orientational structure of a dense dendrimer solution, focusing on the effects of dendrimers' prolate shape and deformability on the short-range order. Our results…

Soft Condensed Matter · Physics 2015-06-17 Ioannis A. Georgiou , Primož Ziherl , Gerhard Kahl

Solutions of interacting linear polymers are mapped onto a system of ``soft'' spherical particles interacting via an effective pair potential. This coarse-graining reduces the individual monomer-level description to a problem involving only…

Soft Condensed Matter · Physics 2007-05-23 V. Krakoviack , J. P. Hansen , A. A. Louis

Ultrasoft colloidal particle fluctuates due to its flexibility. Such fluctuation is essential for colloidal structure and dynamics, but is challenging to quantify experimentally. We use dendrimers as a model system to study the fluctuation…

Soft Condensed Matter · Physics 2021-09-29 Huarui Wu , Jing Song , Wei-Ren Chen , Kun Song , Lionel Porcar , Zhe Wang

Single-chain Monte Carlo simulations of amphiphilic diblock star copolymers were carried out in continuous space using implicit solvents. Two distinct architectures were studied: stars with the hydrophobic blocks attached to the core, and…

Soft Condensed Matter · Physics 2009-11-10 Ronan Connolly , Edward G. Timoshenko , Yuri A. Kuznetsov

Single three dimensional polymers confined to a slab, i.e. to the region between two parallel plane walls, are studied by Monte Carlo simulations. They are described by $N$-step walks on a simple cubic lattice confined to the region $1 \le…

Soft Condensed Matter · Physics 2009-11-10 Hsiao-Ping Hsu , Peter Grassberger

We determine the density expansion of the radius of gyration, of the hydrodynamic radius, and of the end-to-end distance for a monodisperse polymer solution in good-solvent conditions. We consider the scaling limit (large degree of…

Statistical Mechanics · Physics 2007-05-23 Sergio Caracciolo , Bortolo Matteo Mognetti , Andrea Pelissetto

For a model of DNA denaturation, exponents describing the distributions of denaturated loops and unzipped end-segments are determined by exact enumeration and by Monte Carlo simulations in two and three dimensions. The loop distributions…

Statistical Mechanics · Physics 2007-05-23 Marco Baiesi , Enrico Carlon , Attilio Stella

The influence of monomer-monomer interactions on the scaling exponents and shape characteristics of a single polymer chain in a selective solvent is investigated using Langevin dynamics simulations. By systematically increasing the…

Soft Condensed Matter · Physics 2025-04-01 K. Haydukivska

We use molecular dynamics simulations to study the static properties of a single linear multiblock copolymer chain under poor solvent conditions varying the block length $N$, the number of blocks $n$, and the solvent quality by variation of…

Soft Condensed Matter · Physics 2015-03-19 N. G. Fytas , P. E. Theodorakis

Synthetic copolymers and biopolymers, such as polypeptides and double-stranded DNA, often exhibit strong variations in bending stiffness along their contour, which can significantly impact conformational behavior at larger scales. To…

Soft Condensed Matter · Physics 2025-11-04 Yannick Witzky , Friederike Schmid , Arash Nikoubashman

Polymers confined to a narrow channel are subject to strong entropic forces that tend to drive the molecules apart. In this study, we use Monte Carlo computer simulations to study the segregation behavior of two flexible hard-sphere…

Soft Condensed Matter · Physics 2021-01-27 James M. Polson , Qinxin Zhu

The surface tension, the adsorption, and the depletion thickness of polymers close to a single nonadsorbing colloidal sphere are computed by means of Monte Carlo simulations. We consider polymers under good-solvent conditions and in the…

Soft Condensed Matter · Physics 2014-05-06 Giuseppe D'Adamo , Andrea Pelissetto , Carlo Pierleoni

We study the phase behavior of single homopolymers in a simple hydrophobic/hydrophilic off-lattice model with sequence independent local interactions. The specific heat is, not unexpectedly, found to exhibit a pronounced peak well below the…

Soft Condensed Matter · Physics 2009-10-31 Anders Irbäck , Erik Sandelin

The classical cubic dimer model has a columnar ordering transition that is continuous and described by a critical Anderson--Higgs theory containing an SU(2)-symmetric complex field minimally coupled to a noncompact U(1) gauge theory.…

Statistical Mechanics · Physics 2015-11-20 G J Sreejith , Stephen Powell

Specialized Monte Carlo simulation techniques and moment free energy method calculations, capable of treating fractionation exactly, are deployed to study the crystalline phase behaviour of an assembly of spherical particles described by a…

Statistical Mechanics · Physics 2011-03-25 Peter Sollich , Nigel B. Wilding

We derive a set of constraints on soliton solutions using geometric deformations, and transformations by internal symmetries with space-dependent parameters. We show that Derrick's theorem and a more complete set of constraints due to…

High Energy Physics - Theory · Physics 2015-06-16 Sophia K. Domokos , Carlos Hoyos , Jacob Sonnenschein

Diffusion Monte Carlo (DMC) simulations for fermions are becoming the standard to provide high quality reference data in systems that are too large to be investigated via quantum chemical approaches. DMC with the fixed-node approximation…

Chemical Physics · Physics 2016-07-06 Andrea Zen , Sandro Sorella , Michael J. Gillan , Angelos Michaelides , Dario Alfè

Negatively charged DNA can be compacted by positively charged dendrimers and the degree of compaction is a delicate balance between the strength of the electrostatic interaction and the elasticity of DNA. We report various elastic…

Biological Physics · Physics 2013-07-25 Santosh Mogurampelly , Bidisha Nandy , Roland R. Netz , Prabal K. Maiti

We study the conformational dynamics within homo-polymer globules by solvent-implicit Brownian dynamics simulations. A strong dependence of the internal chain dynamics on the Lennard-Jones cohesion strength {\epsilon} and the globule size…

Soft Condensed Matter · Physics 2019-08-15 Thomas R. Einert , Charles E. Sing , Alfredo Alexander-Katz , Roland R. Netz

A strategy is developed for generating equilibrated high molecular-weight polymer melts described with microscopic detail by sequentially backmapping coarse-grained (CG) configurations. The microscopic test model is generic but retains…

Soft Condensed Matter · Physics 2016-10-25 Guojie Zhang , Livia A. Moreira , Torsten Stuehn , Kostas Ch. Daoulas , Kurt Kremer
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