Related papers: Atomic Scale Fractal Dimensionality in Proteins
Structure of cold and hot dense matter at subnuclear densities is investigated by quantum molecular dynamics (QMD) simulations. Obtained phase diagrams show that the density of the phase boundaries between the different nuclear structures…
Most of the known methods for estimating the fractal dimension of fractal sets are based on the evaluation of a single geometric characteristic, e.g. the volume of its parallel sets. We propose a method involving the evaluation of several…
Consider a Brownian particle in three dimensions which is attracted by a plane with a strength proportional to some dimensionless parameter $\alpha$. We investigate the fractal spatial structure of the visited lattice sites in a cubic…
Fractons are anyons classified into equivalence classes and they obey a specific fractal statistics. The equivalence classes are labeled by a fractal parameter or Hausdorff dimension $h$. We consider this approach in the context of the…
Ebert et al. [Phys. Rev. Lett. 77, 3827 (1996)] have fractured icosahedral Al-Mn-Pd single crystals in ultrahigh vacuum and have investigated the cleavage planes in-situ by scanning tunneling microscopy (STM). Globular patterns in the…
This study focuses on the presence of (multi)fractal structures in confined hadronic matter through the momentum distributions of mesons produced in proton-proton collisions between 23 GeV and 63 GeV. The analysis demonstrates that the…
This paper delves into the world of fractal calculus, investigating its implications for fractal sets. It introduces the Fractal Schr\"{o}dinger Equation and provides insights into its consequences. The study presents a General Solution for…
It is shown that a small subset of modes which are likely to be involved in protein functional motions of large amplitude can be determined by retaining the most robust normal modes obtained using different protein models. This result…
Aerosols under chaotic advection often approach a strange attractor. They move chaotically on this fractal set but, in the presence of gravity, they have a net vertical motion downwards. In practical situations, observational data may be…
Nonlinear dynamics in the fundamental interaction between a two-level atom with recoil and a quantized radiation field in a high-quality cavity is studied. We consider the strongly coupled atom-field system as a quantum-classical hybrid…
Background: Nuclear pasta, emerging due to the competition between the long-range Coulomb force and the short-range strong force, is believed to be present in astrophysical scenarios, such as neutron stars and core-collapse supernovae. Its…
Protein-protein interactions (protein functionalities) are mediated by water, which compacts individual proteins and promotes close and temporarily stable large-area protein-protein interfaces. Proteins are peptide chains decorated by amino…
We generalize, and then use, a recently introduced formalism to study thermal fluctuations of atomic displacements in several two and three dimensional crystals. We study both close packed as well as open crystals with multi atom bases.…
Evolutionally conserved quantity that specifies folding nuclei is pursued by a case study for a small protein (PDB code: 1ten). First it is demonstrated that the sequences of amino acids at folding nuclei are not conserved. Then 3D…
We study a system of hard-core particles sliding downwards on a fluctuating one-dimensional surface which is characterized by a dynamical exponent $z$. In numerical simulations, an initially random particle density is found to coarsen and…
The fractal properties of four-dimensional Euclidean simplicial manifold generated by the dynamical triangulation are analyzed on the geodesic distance D between two vertices instead of the usual scale between two simplices. In order to…
The structure of the large scale distribution of the galaxies have been widely studied since the publication of the first catalogs. Since large redshift samples are available, their analyses seem to show fractal correlations up to the…
What are the molecular mechanisms that dictate protein-protein binding stability and whether those are related to the ones behind protein fold stability are still largely open questions. Indeed, despite many past efforts, we still lack…
The molecular dynamics study of fragmentation in peripheral $^{197}$Au +$^{197}$Au collisions at 35 MeV/nucleon is presented to probe the nuclear matter compressibility in low density regime. The yields of different fragment species,…
Phase separation driven by nonequilibrium fluctuations is a hallmark of both living and synthetic active matter. Unlike equilibrium systems, where ordered states arise from the minimization of free energy, active systems are fueled by a…