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Multicellular organisms comprise a diverse collection of stable tissues built from different cell types. It remains unclear how large numbers of interacting cells can precisely coordinate their gene expression during tissue…

Biological Physics · Physics 2022-10-31 Matthew Smart , Anton Zilman

We study the phase ordering dynamics of a two dimensional model colloidal solid using molecular dynamics simulations. The colloid particles interact with each other with a Hamaker potential modified by the presence of equatorial "patches"…

Disordered Systems and Neural Networks · Physics 2014-12-30 Chandana Mondal , Smarajit Karmakar , Surajit Sengupta

This paper investigates steady state solutions of a vasculogenesis model governed by coupled partial differential equations in a bounded two dimensional domain. Explicit steady state solutions are analytically constructed, and their…

Analysis of PDEs · Mathematics 2026-03-31 Sinchita Lahiri , Kun Zhao

Spatially homogeneous random tessellations that are stable under iteration (nesting) in the 3-dimensional Euclidean space are considered, so-called STIT tessellations. They arise as outcome of a spatio-temporal process of subsequent cell…

Probability · Mathematics 2013-09-20 Christoph Thaele , Viola Weiss

The May-Leonard model for three competing species, symmetric with respect to cyclic permutation of the variables and extended by diffusive terms, is considered. Exact time-periodic solutions of the system have been found, and their…

Mathematical Physics · Physics 2025-02-26 Idan Sorin , Alexander Nepomnyashchy , Vladimir Volpert

Curved-sided hexagrams with multiple equilibrium states have great potential in engineering applications such as foldable architectures, deployable aerospace structures, and shape-morphing soft robots. In Part I, the classical stability…

Applied Physics · Physics 2025-01-28 Lu Lu , Jize Dai , Sophie Leanza , John W. Hutchinson , Ruike Renee Zhao

Stationary periodic patterns are widespread in natural sciences, ranging from nano-scale electrochemical and amphiphilic systems to mesoscale fluid, chemical and biological media and to macro-scale vegetation and cloud patterns. Their…

Pattern Formation and Solitons · Physics 2020-07-03 Alon Z. Shapira , Hannes Uecker , Arik Yochelis

We use ab initio density functional calculations to study the formation and structural as well as thermal stability of cellular foam-like carbon nanostructures. These systems with a mixed $sp^2/sp^3$ bonding character may be viewed as…

Materials Science · Physics 2015-06-11 Zhen Zhu , David Tománek

Interfaces between stratified epithelia and their supporting stromas commonly exhibit irregular shapes. Undulations are particularly pronounced in dysplastic tissues and typically evolve into long, finger-like protrusions in carcinomas. In…

Biological Physics · Physics 2013-06-25 Thomas Risler , Markus Basan

Signaling molecules play an important role for many cellular functions. We investigate here a general system of two membrane reaction-diffusion equations coupled to a diffusion equation inside the cell by a Robin-type boundary condition and…

Analysis of PDEs · Mathematics 2015-06-16 Andreas Rätz , Matthias Röger

Biological growth is often driven by mechanical cues, such as changes in external pressure or tensile loading. Moreover, it is well known that many living tissues actively maintain a preferred level of mechanical internal stress, called the…

Biological Physics · Physics 2018-04-24 Alexander Erlich , Derek E. Moulton , Alain Goriely

A symmetric phase field model is used to study wavelength selection in two dimensions. We study the problem in a finite system using a two-pronged approach. First we construct an action and, minimizing this, we obtain the most probable…

Statistical Mechanics · Physics 2009-11-11 R. N. Costa Filho , J. M. Kosterlitz , Enzo Granato

Based on symmetry consideration of migration and shape deformations, we formulate phenomenologically the dynamics of cell crawling in two dimensions. Forces are introduced to change the cell shape. The shape deformations induce migration of…

Biological Physics · Physics 2016-03-23 Takao Ohta , Mitsusuke Tarama , Masaki Sano

We investigate a two-dimensional system of magnetic colloids with anisotropic geometry (rods) subjected to an oscillating external magnetic field. The structural and dynamical properties of the steady states are analyzed, by means of…

Soft Condensed Matter · Physics 2019-08-20 Jorge L. C. Domingos , Everton A. de Freitas , W. P. Ferreira

We introduce a two-dimensional Keller-Segel type free boundary model for motility of eukaryotic cells on substrates. The key ingredients of this model are the Darcy law for overdamped motion of the cytoskeleton (active) gel and Hele-Shaw…

Analysis of PDEs · Mathematics 2019-07-30 Leonid Berlyand , Volodymyr Rybalko

Breaking the chiral symmetry, rotation induces a secondary Hopf bifurcation in weakly nonlinear hexagon patterns which gives rise to oscillating hexagons. We study the stability of the oscillating hexagons using three coupled…

Pattern Formation and Solitons · Physics 2009-10-31 Blas Echebarria , Hermann Riecke

We present a theoretical explanation for the interfacial zigzag instability that appears in anisotropic systems. Such an instability has been experimentally highlighted for an Ising wall formed in a nematic liquid crystal cell under…

Pattern Formation and Solitons · Physics 2009-11-07 C. Chevallard , M. G. Clerc , P. Coullet , J. -M. Gill

Motivated by experiments in electroconvection in nematic liquid crystals with homeotropic alignment we study the coupled amplitude equations describing the formation of a stationary roll pattern in the presence of a weakly-damped mode that…

Pattern Formation and Solitons · Physics 2009-11-07 S. Komineas , H. Zhao , L. Kramer

Solidification structures are determined by the interaction between the interfacial processes and transport processes of heat and solute. In this paper, we investigate planar instability in directional solidification. Firstly, the…

Materials Science · Physics 2022-10-25 Fengyi Yu , Qiaodan Hu , Jianguo Li

Different cell types aggregate and sort into hierarchical architectures during the formation of animal tissues. The resulting spatial organization depends (in part) on the strength of adhesion of one cell type to itself relative to other…

Quantitative Methods · Quantitative Biology 2023-08-02 Dhananjay Bhaskar , William Y. Zhang , Alexandria Volkening , Björn Sandstede , Ian Y. Wong